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Greg Von Kuster
17c5b27cdc
Add support for a single "import_module" to be passed to the new load_datatypes() method in the datatypes registry. This provides the ability to load a single class module from an installed tool shed repository along with a datatypes_conf.xml file included in the installed repository and pass them to the new load_datatypes() method. In the future, multiple imported modules may be allowed. The datatypes_conf.xml file included in the repository must conform to a slightly different definition than the same named file that comes with the distribution. This new definition will be documented in the Galaxy tool shed wiki. We now have the ability to load new data types into the Galaxy server from an installed tool shed repository without restarting the Galaxy server.
GALAXY ====== http://galaxyproject.org/ The latest information about Galaxy is always available via the Galaxy website above. HOW TO START ============ Galaxy requires Python 2.5, 2.6 or 2.7. To check your python version, run: % python -V Python 2.4.4 Start Galaxy: % sh run.sh Once Galaxy completes startup, you should be able to view Galaxy in your browser at: http://localhost:8080 You may wish to make changes from the default configuration. This can be done in the universe_wsgi.ini file. Tools are configured in tool_conf.xml. Details on adding tools can be found on the Galaxy website (linked above). Not all dependencies are included for the tools provided in the sample tool_conf.xml. A full list of external dependencies is available at: http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Dependencies