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276 Commits
Author SHA1 Message Date
Nate Coraor 751b52f1ec Start work on 25.0.2.dev0 2025-06-20 16:37:11 -04:00
Nate Coraor 5915a88342 Create version 25.0.1 2025-06-20 16:37:07 -04:00
Nicola Soranzo 8b8d9794fa Fix one more package extra name containing underscores 2025-06-20 12:12:59 +01:00
Nate Coraor 713a1b57a0 Pin isa-rwval minimum in data package 2025-06-19 14:40:50 -04:00
Ahmed Awan 0d223a99b2 Start work on 25.0.1.dev0 2025-06-18 11:59:57 -05:00
Ahmed Awan b15565d03e Create version 25.0.0 2025-06-18 11:59:32 -05:00
Nate Coraor cb08cd758f Merge branch 'release_24.2' into release_25.0 
# Conflicts:
#	lib/galaxy/version.py
#	packages/app/HISTORY.rst
#	packages/app/setup.cfg
#	packages/auth/HISTORY.rst
#	packages/auth/setup.cfg
#	packages/config/HISTORY.rst
#	packages/config/setup.cfg
#	packages/data/HISTORY.rst
#	packages/data/setup.cfg
#	packages/files/HISTORY.rst
#	packages/files/setup.cfg
#	packages/job_execution/HISTORY.rst
#	packages/job_execution/setup.cfg
#	packages/job_metrics/HISTORY.rst
#	packages/job_metrics/setup.cfg
#	packages/meta/setup.cfg
#	packages/navigation/HISTORY.rst
#	packages/navigation/setup.cfg
#	packages/objectstore/HISTORY.rst
#	packages/objectstore/setup.cfg
#	packages/schema/HISTORY.rst
#	packages/schema/setup.cfg
#	packages/selenium/HISTORY.rst
#	packages/selenium/setup.cfg
#	packages/test_api/HISTORY.rst
#	packages/test_api/setup.cfg
#	packages/test_base/HISTORY.rst
#	packages/test_base/setup.cfg
#	packages/test_driver/HISTORY.rst
#	packages/test_driver/setup.cfg
#	packages/tool_shed/HISTORY.rst
#	packages/tool_shed/setup.cfg
#	packages/tool_util/HISTORY.rst
#	packages/tool_util/setup.cfg
#	packages/tours/HISTORY.rst
#	packages/tours/setup.cfg
#	packages/util/HISTORY.rst
#	packages/util/setup.cfg
#	packages/web_apps/HISTORY.rst
#	packages/web_apps/setup.cfg
#	packages/web_framework/HISTORY.rst
#	packages/web_framework/setup.cfg
#	packages/web_stack/HISTORY.rst
#	packages/web_stack/setup.cfg
 2025-06-17 12:17:33 -04:00
Nate Coraor dcd4cdca08 Start work on 24.2.5.dev0 2025-06-17 12:17:28 -04:00
Nate Coraor 7b1e4465bf Create version 24.2.4 2025-06-17 12:17:16 -04:00
John Davis 9b63eaf76c Add script to delete old job metrics records 2025-05-09 12:19:14 +02:00
Eli Chadwick 138b993946 add roc-validator to package test requirements 2025-05-07 10:45:12 +01:00
John Davis f236237d81 Add script to delete old galaxy session records 2025-04-28 12:49:10 -04:00
mvdbeek 3c6b6c5971 Merge branch 'release_24.2' into dev 2025-03-26 09:51:08 +01:00
mvdbeek 648239a31f Merge branch 'release_24.1' into release_24.2 2025-03-26 09:48:18 +01:00
mvdbeek 953a972349 Merge branch 'release_24.0' into release_24.1 2025-03-26 09:44:07 +01:00
Nicola Soranzo fb6139449c Drop unused alembic-utils from galaxy-data package requirements 
Last use removed in https://github.com/galaxyproject/galaxy/pull/15876 .
 2025-03-25 13:59:13 +00:00
Leonid Kostrykin 8a7191982e Fix package tests 2025-03-25 14:36:47 +01:00
mvdbeek c6b2a34916 Merge branch 'release_24.2' into dev 
# Conflicts:
#	lib/galaxy/version.py
#	packages/app/HISTORY.rst
#	packages/app/setup.cfg
#	packages/auth/HISTORY.rst
#	packages/auth/setup.cfg
#	packages/config/HISTORY.rst
#	packages/config/setup.cfg
#	packages/data/HISTORY.rst
#	packages/data/setup.cfg
#	packages/files/HISTORY.rst
#	packages/files/setup.cfg
#	packages/job_execution/HISTORY.rst
#	packages/job_execution/setup.cfg
#	packages/job_metrics/HISTORY.rst
#	packages/job_metrics/setup.cfg
#	packages/navigation/HISTORY.rst
#	packages/navigation/setup.cfg
#	packages/objectstore/HISTORY.rst
#	packages/objectstore/setup.cfg
#	packages/schema/HISTORY.rst
#	packages/schema/setup.cfg
#	packages/selenium/HISTORY.rst
#	packages/selenium/setup.cfg
#	packages/test_api/HISTORY.rst
#	packages/test_api/setup.cfg
#	packages/test_base/HISTORY.rst
#	packages/test_base/setup.cfg
#	packages/test_driver/HISTORY.rst
#	packages/test_driver/setup.cfg
#	packages/tool_shed/HISTORY.rst
#	packages/tool_shed/setup.cfg
#	packages/tool_util/HISTORY.rst
#	packages/tool_util/setup.cfg
#	packages/tours/HISTORY.rst
#	packages/tours/setup.cfg
#	packages/util/HISTORY.rst
#	packages/util/setup.cfg
#	packages/web_apps/HISTORY.rst
#	packages/web_apps/setup.cfg
#	packages/web_framework/HISTORY.rst
#	packages/web_framework/setup.cfg
#	packages/web_stack/HISTORY.rst
#	packages/web_stack/setup.cfg
 2025-03-16 11:38:19 +01:00
mvdbeek 6a610a1b4b Start work on 24.2.4.dev0 2025-03-16 11:38:12 +01:00
mvdbeek f82f1fc5e8 Create version 24.2.3 2025-03-16 11:37:42 +01:00
mvdbeek c996ec452f Merge branch 'release_24.2' into dev 
# Conflicts:
#	lib/galaxy/version.py
#	packages/app/HISTORY.rst
#	packages/app/setup.cfg
#	packages/auth/HISTORY.rst
#	packages/auth/setup.cfg
#	packages/config/HISTORY.rst
#	packages/config/setup.cfg
#	packages/data/HISTORY.rst
#	packages/data/setup.cfg
#	packages/files/HISTORY.rst
#	packages/files/setup.cfg
#	packages/job_execution/HISTORY.rst
#	packages/job_execution/setup.cfg
#	packages/job_metrics/HISTORY.rst
#	packages/job_metrics/setup.cfg
#	packages/navigation/HISTORY.rst
#	packages/navigation/setup.cfg
#	packages/objectstore/HISTORY.rst
#	packages/objectstore/setup.cfg
#	packages/schema/HISTORY.rst
#	packages/schema/setup.cfg
#	packages/selenium/HISTORY.rst
#	packages/selenium/setup.cfg
#	packages/test_api/HISTORY.rst
#	packages/test_api/setup.cfg
#	packages/test_base/HISTORY.rst
#	packages/test_base/setup.cfg
#	packages/test_driver/HISTORY.rst
#	packages/test_driver/setup.cfg
#	packages/tool_shed/HISTORY.rst
#	packages/tool_shed/setup.cfg
#	packages/tool_util/HISTORY.rst
#	packages/tool_util/setup.cfg
#	packages/tours/HISTORY.rst
#	packages/tours/setup.cfg
#	packages/util/HISTORY.rst
#	packages/util/setup.cfg
#	packages/web_apps/HISTORY.rst
#	packages/web_apps/setup.cfg
#	packages/web_framework/HISTORY.rst
#	packages/web_framework/setup.cfg
#	packages/web_stack/HISTORY.rst
#	packages/web_stack/setup.cfg
 2025-03-08 11:44:14 +01:00
mvdbeek 7ad18a9d78 Start work on 24.2.3.dev0 2025-03-08 11:44:06 +01:00
mvdbeek c80d7d92a1 Create version 24.2.2 2025-03-08 11:44:03 +01:00
Matthias Bernt 9d876d1a52 Merge branch 'release_24.2' into dev 
# Conflicts:
#	lib/galaxy/version.py
#	packages/app/HISTORY.rst
#	packages/app/setup.cfg
#	packages/auth/HISTORY.rst
#	packages/auth/setup.cfg
#	packages/config/HISTORY.rst
#	packages/config/setup.cfg
#	packages/data/HISTORY.rst
#	packages/data/setup.cfg
#	packages/files/HISTORY.rst
#	packages/files/setup.cfg
#	packages/job_execution/HISTORY.rst
#	packages/job_execution/setup.cfg
#	packages/job_metrics/HISTORY.rst
#	packages/job_metrics/setup.cfg
#	packages/navigation/HISTORY.rst
#	packages/navigation/setup.cfg
#	packages/objectstore/HISTORY.rst
#	packages/objectstore/setup.cfg
#	packages/schema/HISTORY.rst
#	packages/schema/setup.cfg
#	packages/selenium/HISTORY.rst
#	packages/selenium/setup.cfg
#	packages/test_api/HISTORY.rst
#	packages/test_api/setup.cfg
#	packages/test_base/HISTORY.rst
#	packages/test_base/setup.cfg
#	packages/test_driver/HISTORY.rst
#	packages/test_driver/setup.cfg
#	packages/tool_shed/HISTORY.rst
#	packages/tool_shed/setup.cfg
#	packages/tool_util/HISTORY.rst
#	packages/tool_util/setup.cfg
#	packages/tours/HISTORY.rst
#	packages/tours/setup.cfg
#	packages/util/HISTORY.rst
#	packages/util/setup.cfg
#	packages/web_apps/HISTORY.rst
#	packages/web_apps/setup.cfg
#	packages/web_framework/HISTORY.rst
#	packages/web_framework/setup.cfg
#	packages/web_stack/HISTORY.rst
#	packages/web_stack/setup.cfg
 2025-02-28 12:39:11 +01:00
Matthias Bernt 5547ad5db9 Start work on 24.2.2.dev0 2025-02-28 12:39:06 +01:00
Matthias Bernt 8ff7c9b1b8 Create version 24.2.1 2025-02-28 12:39:03 +01:00
Nicola Soranzo edd8bccf4f Drop support for Python 3.8 2025-02-25 19:20:46 +00:00
John Davis 4f8244bc10 Merge branch 'release_24.2' into dev 2025-02-11 21:03:18 -05:00
John Davis b56638b9d6 Start work on 24.2.1.dev0 2025-02-11 20:41:00 -05:00
John Davis 490257d237 Create version 24.2.0 
This is the final version 24.2.0.
It contains the content generated by the release script, minus the
duplicate content (which resulted from the existing 24.2.0 changelogs
that had been pushed upstream on 2/6/25).
 2025-02-11 20:36:31 -05:00
John Davis 898fcfc981 Merge branch 'release_24.2' into dev 2025-02-11 09:48:43 -05:00
John Davis a6f3d74f9b Remove isa-rwval dependency from data package 2025-02-10 16:53:01 -05:00
Nicola Soranzo 829c7459f9 Merge branch 'release_24.2' into dev 2025-02-08 21:14:23 +00:00
Nicola Soranzo 1bc76f0c40 Add Python 3.13 classifier to packages 
Follow-up on https://github.com/galaxyproject/galaxy/pull/18449 .
 2025-02-08 18:58:58 +00:00
John Davis 54f918d09c Fix package versions 2025-02-07 00:53:54 -05:00
John Davis c1934993ef Merge branch 'release_24.2' into dev 
# Conflicts:
#	lib/galaxy/version.py
#	packages/app/HISTORY.rst
#	packages/auth/HISTORY.rst
#	packages/config/HISTORY.rst
#	packages/data/HISTORY.rst
#	packages/files/HISTORY.rst
#	packages/job_execution/HISTORY.rst
#	packages/job_metrics/HISTORY.rst
#	packages/navigation/HISTORY.rst
#	packages/objectstore/HISTORY.rst
#	packages/schema/HISTORY.rst
#	packages/selenium/HISTORY.rst
#	packages/test_api/HISTORY.rst
#	packages/test_base/HISTORY.rst
#	packages/test_driver/HISTORY.rst
#	packages/tool_shed/HISTORY.rst
#	packages/tool_util/HISTORY.rst
#	packages/tours/HISTORY.rst
#	packages/util/HISTORY.rst
#	packages/web_apps/HISTORY.rst
#	packages/web_framework/HISTORY.rst
#	packages/web_stack/HISTORY.rst
 2025-02-06 22:46:18 -05:00
John Davis e3b1795275 Start work on 24.2.1.dev0 2025-02-06 22:46:15 -05:00
John Davis 2bff8f5a9a Create version 24.2.0 2025-02-06 22:46:04 -05:00
Matthias Bernt 21f8bc80ad Merge branch 'release_24.2' into dev 2024-12-11 10:48:13 +01:00
Matthias Bernt b5c1637a45 Merge branch 'release_24.1' into release_24.2 
# Conflicts:
#	lib/galaxy/version.py
#	packages/app/HISTORY.rst
#	packages/app/setup.cfg
#	packages/auth/HISTORY.rst
#	packages/auth/setup.cfg
#	packages/config/HISTORY.rst
#	packages/config/setup.cfg
#	packages/data/HISTORY.rst
#	packages/data/setup.cfg
#	packages/files/HISTORY.rst
#	packages/files/setup.cfg
#	packages/job_execution/HISTORY.rst
#	packages/job_execution/setup.cfg
#	packages/job_metrics/HISTORY.rst
#	packages/job_metrics/setup.cfg
#	packages/navigation/HISTORY.rst
#	packages/navigation/setup.cfg
#	packages/objectstore/HISTORY.rst
#	packages/objectstore/setup.cfg
#	packages/schema/HISTORY.rst
#	packages/schema/setup.cfg
#	packages/selenium/HISTORY.rst
#	packages/selenium/setup.cfg
#	packages/test_api/HISTORY.rst
#	packages/test_api/setup.cfg
#	packages/test_base/HISTORY.rst
#	packages/test_base/setup.cfg
#	packages/test_driver/HISTORY.rst
#	packages/test_driver/setup.cfg
#	packages/tool_shed/HISTORY.rst
#	packages/tool_shed/setup.cfg
#	packages/tool_util/HISTORY.rst
#	packages/tool_util/setup.cfg
#	packages/tours/HISTORY.rst
#	packages/tours/setup.cfg
#	packages/util/HISTORY.rst
#	packages/util/setup.cfg
#	packages/web_apps/HISTORY.rst
#	packages/web_apps/setup.cfg
#	packages/web_framework/HISTORY.rst
#	packages/web_framework/setup.cfg
#	packages/web_stack/HISTORY.rst
#	packages/web_stack/setup.cfg
 2024-12-11 10:48:07 +01:00
Matthias Bernt 0f83529907 Start work on 24.1.5.dev0 2024-12-11 10:47:56 +01:00
Matthias Bernt db7395b423 Create version 24.1.4 2024-12-11 10:47:48 +01:00
Nicola Soranzo ac480e7df5 Drop use of deprecated imghdr standard library module 
which has been removed in the upcoming Python 3.13 .
 2024-10-31 12:09:21 +00:00
Nicola Soranzo f0420d70a3 Pin minimum package versions for Python 3.13 support 
Also:
- Cheetah3 package on PyPI has been renamed to CT3 since 3.3.0, see
  https://cheetahtemplate.org/news.html
 2024-10-31 12:09:20 +00:00
Nicola Soranzo b2c9f192e3 Merge branch 'release_24.1' into dev 2024-10-27 12:41:02 +00:00
Nate Coraor ccf4353f09 Merge pull request #19052 from natefoo/unpin-data-pkg-social-auth-core 
[24.1] Unpin social-auth-core in galaxy-data package
 2024-10-25 09:37:38 -04:00
Matthias Bernt 3d66d5f8ae Merge branch 'release_24.1' into dev 
# Conflicts:
#	lib/galaxy/version.py
#	packages/app/HISTORY.rst
#	packages/app/setup.cfg
#	packages/auth/HISTORY.rst
#	packages/auth/setup.cfg
#	packages/config/HISTORY.rst
#	packages/config/setup.cfg
#	packages/data/HISTORY.rst
#	packages/data/setup.cfg
#	packages/files/HISTORY.rst
#	packages/files/setup.cfg
#	packages/job_execution/HISTORY.rst
#	packages/job_execution/setup.cfg
#	packages/job_metrics/HISTORY.rst
#	packages/job_metrics/setup.cfg
#	packages/navigation/HISTORY.rst
#	packages/navigation/setup.cfg
#	packages/objectstore/HISTORY.rst
#	packages/objectstore/setup.cfg
#	packages/schema/HISTORY.rst
#	packages/schema/setup.cfg
#	packages/selenium/HISTORY.rst
#	packages/selenium/setup.cfg
#	packages/test_api/HISTORY.rst
#	packages/test_api/setup.cfg
#	packages/test_base/HISTORY.rst
#	packages/test_base/setup.cfg
#	packages/test_driver/HISTORY.rst
#	packages/test_driver/setup.cfg
#	packages/tool_shed/HISTORY.rst
#	packages/tool_shed/setup.cfg
#	packages/tool_util/HISTORY.rst
#	packages/tool_util/setup.cfg
#	packages/tours/HISTORY.rst
#	packages/tours/setup.cfg
#	packages/util/HISTORY.rst
#	packages/util/setup.cfg
#	packages/web_apps/HISTORY.rst
#	packages/web_apps/setup.cfg
#	packages/web_framework/HISTORY.rst
#	packages/web_framework/setup.cfg
#	packages/web_stack/HISTORY.rst
#	packages/web_stack/setup.cfg
 2024-10-25 12:51:19 +02:00
Matthias Bernt 17056521bd Start work on 24.1.4.dev0 2024-10-25 12:51:08 +02:00
Matthias Bernt 71f5048e52 Create version 24.1.3 2024-10-25 12:51:02 +02:00
Nate CoraorandNicola Soranzo fb4e1d0e61 Update packages/data/setup.cfg 
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2024-10-24 08:36:46 -04:00