Wen-Yu Chung 2f96d33be7 fix a bug that caused list index out of range (because there's empty lines).

2008-02-06 18:07:00 +00:00

..

data_source

Added blurb to Get ENCODE Data tools telling user data may not be current.

2008-01-14 21:39:11 +00:00

emboss

Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.

2008-01-24 20:37:12 +00:00

emboss_5

Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.

2008-01-24 20:37:12 +00:00

encode

New reports app server and 1st report showing disk usage for dataset file system - still need to mess with styles a bit.

2008-01-11 21:24:21 +00:00

extract

Better error handling in extract_genomic_dna tool, behavior doesn't change so new version not necessary.

2008-02-05 20:13:07 +00:00

fasta_tools

fix a bug that caused list index out of range (because there's empty lines).

2008-02-06 18:07:00 +00:00

filters

Added missing test data result files for new version of joiner tool.

2008-02-02 16:03:48 +00:00

hyphy

Minor modifications to HYPHY dN/dS tool.

2008-01-23 16:17:30 +00:00

maf

Forgot to import tempfile in maf_to_bed.py. Used when creating multiple

2008-02-05 16:37:49 +00:00

metag_tools

update several xml files for better help descriptions.

2008-02-05 18:32:42 +00:00

new_operations

Reverting the test data for the gops_cluster tool to that which was originally used by Ian in rev 1636.

2008-01-07 13:02:10 +00:00

patmat

Changing all tools that use 'text' as file extension to now use 'txt'. We are eliminating the use of 'text' as a file extension within Galaxy and will now use only 'txt' for Text data types.

2007-09-27 12:24:27 +00:00

plotting

Bug fix in histogram tool.

2007-12-11 21:41:31 +00:00

regVariation

Modifications to Feature Coverage tool: Output format changed and test-data updated.

2008-01-25 22:19:57 +00:00

stats

Modified 'Group' tool - Added new options: Count and Count distinct. Also added an option to round the result.

2008-02-05 16:57:29 +00:00

validation

Cleanup: removing the cookbook package. Bunch and odict move to galaxy.util, tools

2007-07-31 15:45:59 +00:00

visualization

Eliminated Dataset.state.FAKE (requires db update), replacing it with Dataset.state.OK since fake datasets are removed, causing problems for workflow.

2007-12-21 19:31:58 +00:00