mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
Bug fix in histogram tool.
This commit is contained in:
@@ -16,7 +16,7 @@ def main():
|
||||
try:
|
||||
column = int( sys.argv[3] ) - 1
|
||||
except:
|
||||
stop_err( "..Column not specified, your query does not contain a column of numerical data." )
|
||||
stop_err( "Column not specified, your query does not contain a column of numerical data." )
|
||||
title = sys.argv[4]
|
||||
xlab = sys.argv[5]
|
||||
breaks = int( sys.argv[6] )
|
||||
@@ -65,7 +65,6 @@ def main():
|
||||
matrix.append( row )
|
||||
|
||||
if skipped_lines < i:
|
||||
print "..on columnn %s" %sys.argv[3]
|
||||
try:
|
||||
a = array( matrix )
|
||||
r.pdf( out_fname, 8, 8 )
|
||||
@@ -73,13 +72,14 @@ def main():
|
||||
if density:
|
||||
r.lines( r.density( a ) )
|
||||
r.dev_off()
|
||||
except exc:
|
||||
stop_err("Building histogram resulted in error: %s." %str( exc ))
|
||||
except Exception, exc:
|
||||
stop_err( "%s" %str( exc ) )
|
||||
print "..on columnn %s" %sys.argv[3]
|
||||
else:
|
||||
print "..all values in column %s are non-numeric." %sys.argv[3]
|
||||
|
||||
if skipped_lines > 0:
|
||||
print "..skipped %d invalid lines starting with line #%d. Value '%s' is not numeric." % ( skipped_lines, first_invalid_line, invalid_value )
|
||||
print "..skipped %d invalid lines starting with line #%d containing value '%s'." % ( skipped_lines, first_invalid_line, invalid_value )
|
||||
|
||||
r.quit( save="no" )
|
||||
|
||||
|
||||
Reference in New Issue
Block a user