In https://github.com/galaxyproject/galaxy/pull/4254 `vcf_bgzip` was made
a proper datatype with the introduction of the `VcfGz` class, but was
still described as a subclass in `datatypes_conf.xml` .
Also fix `file_ext` attribute in `BaseVcf` and subclasses.
This directory contains tools only useful for testing and
demonstrating aspects of the tool syntax. Run the test driver script
'run_tests.sh' with the '-framework' as first argument to run through
these tests. Pass in an '-id' along with one of these tool ids to test
a single tool.
Some API tests use these tools to test various features of the API,
tool, and workflow subsystems. Pass the argument
'-with_framework_test_tools' to 'run_tests.sh' in addition to '-api'
to ensure these tools get loaded during the testing process.
Finally, to play around with these tools interactively - simply
replace the 'galaxy.ini' option 'tool_config_file' with:
tool_config_file = test/functional/tools/samples_tool_conf.xml
Nicola Soranzo
8dc0e697d3