Add some docs to more complicated nested collection creation examples.

As suggested by @bgruening in https://github.com/galaxyproject/galaxy/pull/538#discussion_r36004578.
This commit is contained in:
John Chilton
2015-07-31 15:13:00 +01:00
parent 84e8e3e71f
commit 3945c5ed6c
2 changed files with 10 additions and 0 deletions
@@ -17,6 +17,11 @@
</inputs>
<outputs>
<collection name="list_output" type="list:paired" label="Duplicate List">
<!-- Use named regex group to grab pattern
<identifier_0>_<identifier_1>.fq. Here identifier_0 is the list
identifier in the nested collection and identifier_1 is either
forward or reverse (for instance samp1_forward.fq).
-->
<discover_datasets pattern="(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)\.fq" ext="fastqsanger" visible="true" />
</collection>
</outputs>
@@ -12,6 +12,11 @@
</inputs>
<outputs>
<collection name="list_output" type="list:list" label="Duplicate List">
<!-- Use named regex group to grab pattern
<identifier_0>_<identifier_1>.fq. Here identifier_0 is the list
identifier of the outer list and identifier_1 is the list identifier
of the inner list (for instance oe1_ie2.fq in above example).
-->
<discover_datasets pattern="(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)\.fq" ext="fastqsanger" visible="true" />
</collection>
</outputs>