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Nate Coraor
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correct if the proxy uses a different transport with clients than it does with Galaxy. This doesn't work automatically. In Apache, you'd need to set the header yourself: RequestHeader set X-URL-SCHEME https For a discussion on how this affects links to the UCSC Genome Browser, see: http://mail.bx.psu.edu/pipermail/galaxy-user/2009-January/000430.html
GALAXY ====== http://g2.bx.psu.edu/ The latest information about Galaxy is always available via the Galaxy website above. HOW TO START ============ Galaxy requires Python 2.4 or 2.5. To check your python version, run: % python -V Python 2.4.4 Before starting Galaxy for the first time, please run the setup script: % sh setup.sh If setup.sh finishes successfully, you can then proceed to starting Galaxy: % sh run.sh Once Galaxy completes startup, you should be able to view Galaxy in your browser at: http://localhost:8080 You may wish to make changes from the default configuration. This can be done in the universe_wsgi.ini file. Tools are configured in tool_conf.xml. Details on adding tools can be found on the Galaxy website (linked above). Not all dependencies are included for the tools provided in the sample tool_conf.xml. A full list of external dependencies is available at: http://g2.trac.bx.psu.edu/wiki/ToolDependencies