fix for short read score distribution tool. restore test data.

This commit is contained in:
Wen-Yu Chung
2008-12-19 14:25:43 -05:00
parent 170f9d2d77
commit b31191d4bd
2 changed files with 2 additions and 4 deletions
Binary file not shown.

Before

Width:  |  Height:  |  Size: 4.2 KiB

After

Width:  |  Height:  |  Size: 3.8 KiB

@@ -62,9 +62,9 @@ def merge_to_20_datapoints( score ):
return score_points
def __main__():
invalid_lines = 0
infile_score_name = sys.argv[1].strip()
outfile_R_name = sys.argv[2].strip()
@@ -153,7 +153,6 @@ def __main__():
number_of_points = 20
else:
number_of_points = read_length
read_length_threshold = 100 # minimal read length for 454 file
score_points = []
score_matrix = []
@@ -180,7 +179,6 @@ def __main__():
big = 0
tmp_array.append( big )
score_points.append( tmp_array )
elif seq_method == '454':
# skip the last fasta sequence
score = ''