mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-24 16:30:27 +08:00
fix for short read score distribution tool. restore test data.
This commit is contained in:
Binary file not shown.
|
Before Width: | Height: | Size: 4.2 KiB After Width: | Height: | Size: 3.8 KiB |
@@ -62,9 +62,9 @@ def merge_to_20_datapoints( score ):
|
||||
return score_points
|
||||
|
||||
def __main__():
|
||||
|
||||
|
||||
invalid_lines = 0
|
||||
|
||||
|
||||
infile_score_name = sys.argv[1].strip()
|
||||
outfile_R_name = sys.argv[2].strip()
|
||||
|
||||
@@ -153,7 +153,6 @@ def __main__():
|
||||
number_of_points = 20
|
||||
else:
|
||||
number_of_points = read_length
|
||||
|
||||
read_length_threshold = 100 # minimal read length for 454 file
|
||||
score_points = []
|
||||
score_matrix = []
|
||||
@@ -180,7 +179,6 @@ def __main__():
|
||||
big = 0
|
||||
tmp_array.append( big )
|
||||
score_points.append( tmp_array )
|
||||
|
||||
elif seq_method == '454':
|
||||
# skip the last fasta sequence
|
||||
score = ''
|
||||
|
||||
Reference in New Issue
Block a user