Daniel Blankenberg 1260d07a28 Have IGV external display application load a set of links for available genomes via a tool data table that reads a URL (http://igv.broadinstitute.org/genomes/genomes.txt). The manually specified builds links should now be used to add additional builds, or for alias mapping (e.g. hg_g1k_v37-->b37).

2015-02-27 15:50:28 -05:00

..

ensembl

Remove the BuildSites class I recently created and merge its functionality back into util and the datatypes registry. As a result, the build_sites configuration moves to datatypes_conf.xml and display applications can now use configured build sites so that the path is not hardcoded into the individual committed display application files. from_file in the display applications is still supported.

2014-09-02 18:20:23 -04:00

gbrowse

Move ucsc_display_sites and gbrowse_display_sites into datatypes_conf.xml's new <build_sites> section, as per the suggestion by @nsoranzo.

2014-09-03 12:25:22 -04:00

igb

IGB can read over https just fine (but won't follow 307 Temporary Redirects). Remove strip_https flag from IGB external display applications.

2014-07-28 16:25:07 -04:00

igv

Have IGV external display application load a set of links for available genomes via a tool data table that reads a URL (http://igv.broadinstitute.org/genomes/genomes.txt). The manually specified builds links should now be used to add additional builds, or for alias mapping (e.g. hg_g1k_v37-->b37).

2015-02-27 15:50:28 -05:00

rviewer

Remove the BuildSites class I recently created and merge its functionality back into util and the datatypes registry. As a result, the build_sites configuration moves to datatypes_conf.xml and display applications can now use configured build sites so that the path is not hardcoded into the individual committed display application files. from_file in the display applications is still supported.

2014-09-02 18:20:23 -04:00

ucsc

Fix references to config.ucsc_display_sites that I missed.

2014-09-10 14:37:33 -04:00