Commit Graph
204 Commits
Author SHA1 Message Date
Enis Afgan dc248bb980 Add icons for many ITs 2025-05-12 10:07:25 -04:00
Dannon Baker 3bf1e0400e Add a set of logos for interactive tools 2025-05-12 10:07:24 -04:00
Dannon Baker 312c134493 Square-ify jupyter logo 2025-05-12 10:07:24 -04:00
Dannon Baker 452f3e402c Logo for jupyter notebook 2025-05-12 10:07:24 -04:00
Nate Coraor cf1333a148 Also chown R lib in RStudio BioC tool 2025-04-16 11:39:38 -04:00
Enis Afgan d7bddb5116 RStudio IT updates to work on .org 2025-03-27 19:46:10 -04:00
Enis Afgan 1d215a7d2d Add RStudio IT based on upstream image from Bioconductor 2025-03-18 16:45:14 -04:00
Enis Afgan c6e553be71 Update RStudio IT 2025-02-26 16:01:00 -05:00
Marius van den Beek 9960c31265 Merge pull request #16837 from lldelisle/ilastik
Add Interactive Tool Ilastik
2024-11-15 18:44:09 +01:00
Nate Coraor 615bd19718 Keep Jupyter 1.0.1 IT as a separate tool 2024-10-01 12:21:29 -04:00
Nate Coraor 1e0f928809 Jupyter Interactive Tool 1.0.1/24.07 2024-09-20 13:07:10 -04:00
Delphine LariviereandBjörn Grüning 8dea665f08 Apply suggestions from code review
Co-authored-by: Björn Grüning <bjoern@gruenings.eu>
2024-08-01 11:25:09 -04:00
Delphine Lariviere 0bc0f984f8 add blob toolkit to the list of interactive tools 2024-07-31 18:57:26 -04:00
Martin Cech ed117ef483 Merge pull request #18220 from anuprulez/patch-5
Update GPU JupyterLab tool
2024-06-11 02:31:31 +02:00
Nate Coraor 3359a75ffc Merge pull request #18225 from thepineapplepirate/qiskit_in_galaxy
new edits and now using a docker image with qiskit1.0
2024-06-03 13:53:42 -04:00
thepineapplepirate b38e85cef3 bumped up version 2024-05-24 14:41:07 -05:00
thepineapplepirate b7cc2e8356 new edits and now using a docker image with qiskit1.0 2024-05-24 14:15:11 -05:00
Anup Kumar a55a56938b Update GPU JupyterLab tool
- Add a new version (0.4)
- Add feature to take GitHub URL to clone repositories while startup
2024-05-24 11:51:31 +02:00
Helena Rasche 072a1ea12a Rename to something more searchable 2024-03-27 13:43:46 +01:00
Nate Coraor 5bbfa85ab3 Update RStudio GxIT to use the reworked 23.1 image 2024-02-22 15:08:08 -05:00
Björn Grüning 26ffc86b93 Merge pull request #17170 from thepineapplepirate/qiskit_in_galaxy
Qiskit in galaxy
2023-12-12 21:26:59 +01:00
thepineapplepirateandNicola Soranzo 48417b0409 Update tools/interactive/interactivetool_qiskit_jupyter_notebook.xml
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
2023-12-12 14:09:27 -05:00
Raubenolt 46d53d14c8 made suggested changes 2023-12-11 20:47:25 -05:00
Sveinung Gundersen b0e13e5149 Added "requires_path_in_url" and "requires_path_in_header" attributes to entry points for tools. Sendoff to gx-it-proxy. Cleanup 2023-11-15 12:54:14 +01:00
Sveinung Gundersen 51db30370c Using label instead of name to identify entrypoint 2023-11-15 12:54:14 +01:00
Sveinung Gundersen 05f8de5d98 Updated JupyTool, Open Refine, Guacamole Desktop, and RStudio tools to potentially support path-based proxy 2023-11-15 12:48:39 +01:00
Marius van den Beek eecaeb7fad Merge pull request #15313 from pcm32/patch-14
Update cellxgene interactive tool to 1.1.1
2023-10-20 15:48:14 +02:00
Lucille Delisle 822f4c5927 use directory where app user has rw access 2023-10-13 14:05:05 +02:00
Lucille Delisle ce82be8f44 raise error when identical identifiers 2023-10-12 15:31:46 +02:00
Lucille Delisle 9a1cc32e34 add ./ 2023-10-12 15:10:37 +02:00
Björn Grüning 8092aba68e add some quotes 2023-10-12 14:11:55 +02:00
Lucille Delisle 4110a93cbf add more info in help section 2023-10-12 08:57:35 +02:00
Lucille Delisle 8aac1ccf62 change run_ilastik to ilastik_with_args to fit the docker image + put images in working directory. 2023-10-12 08:57:12 +02:00
Lucille Delisle aa947abe85 change command and output to make it work 2023-10-10 14:19:10 +02:00
Lucille Delisle 57c1c65cfb fix entry_point 2023-10-09 14:20:22 +02:00
Lucille Delisle ada2dd8015 use available arguments 2023-10-06 17:55:11 +02:00
Ubuntu 65529d132c ilastik wrapper added 2023-10-06 14:10:38 +00:00
thepineapplepirate 566f3973ad new interactive tool for Qiskit in Galaxy 2023-10-04 15:57:32 -04:00
mvdbeek 913182fac9 Merge branch 'release_23.1' into dev 2023-08-31 13:04:47 +02:00
Cameron Hyde 517ca97c03 Remove render.py script from iSEE 2023-08-30 09:50:48 +10:00
Sandy Rogers 330310e69f Update interactivetool_mgnify_notebook to v1.2.2 2023-08-04 11:28:39 +01:00
Sandy Rogers 8a1b58caf0 Update MGnify interactive tool to v1.1.0 2023-06-02 17:34:00 +01:00
Pablo Moreno 1741fa45ee Some tabs to spaces 2023-03-28 10:19:54 +01:00
Pablo Moreno 0b20473129 Layer and optionally make var field unique. 2023-03-27 15:06:15 +01:00
Pablo Moreno 703751b65c Avoid errors automatically detected by galaxy due to stderr output 2023-03-08 13:17:11 +00:00
Pablo Moreno 999322b354 Adds previous version as separate file 2023-03-07 12:05:10 +00:00
Pablo Moreno e9e8f9be27 Change name and tutorial link 2023-03-07 12:03:34 +00:00
Pablo Moreno acc34f6d21 Adds help 2023-03-07 08:59:43 +00:00
Anup Kumar 56a2ace72d Update interactivetool_ml_jupyter_notebook.xml
Add changes to GPU Jupyterlab tool based on Jupytool
2023-01-24 16:02:15 +01:00
Pablo Moreno acd862c632 Clean up 2023-01-16 17:29:22 +00:00