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rename scripts
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@@ -18,7 +18,7 @@ About the Script
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----------------
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Once you've registered your Galaxy instance, you'll receive an instance ID and
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an API key which are used to run ``scripts/grt/grt.py``. The tool itself is very
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an API key which are used to run ``scripts/grt/export.py``. The tool itself is very
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simple to run. GRT will run and produce a directory of reports that can be
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synced with the GRT server. Every time it is run, GRT only processes the list
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of jobs that were run since the last time it was run. On first run, GRT will
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@@ -72,10 +72,10 @@ Data Collection Process
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.. code-block:: console
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cd $GALAXY; python scripts/grt/grt.py -l debug
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cd $GALAXY; python scripts/grt/export.py -l debug
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``grt.py`` connects to your galaxy database and makes queries against the
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``export.py`` connects to your galaxy database and makes queries against the
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database for three primary tables:
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- job
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@@ -99,9 +99,9 @@ Data Submission
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.. code-block:: console
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cd $GALAXY; python scripts/grt/grt-submit.py
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cd $GALAXY; python scripts/grt/upload.py
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``scripts/grt/grt-submit.py`` is a script which will submit your data to the
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``scripts/grt/upload.py`` is a script which will submit your data to the
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configured GRT server. You must first be registered with the server which will
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also walk you through the setup process.
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