diff --git a/doc/source/admin/special_topics/grt.rst b/doc/source/admin/special_topics/grt.rst index 01fc1ef90a3..20292c1d80a 100644 --- a/doc/source/admin/special_topics/grt.rst +++ b/doc/source/admin/special_topics/grt.rst @@ -18,7 +18,7 @@ About the Script ---------------- Once you've registered your Galaxy instance, you'll receive an instance ID and -an API key which are used to run ``scripts/grt/grt.py``. The tool itself is very +an API key which are used to run ``scripts/grt/export.py``. The tool itself is very simple to run. GRT will run and produce a directory of reports that can be synced with the GRT server. Every time it is run, GRT only processes the list of jobs that were run since the last time it was run. On first run, GRT will @@ -72,10 +72,10 @@ Data Collection Process .. code-block:: console - cd $GALAXY; python scripts/grt/grt.py -l debug + cd $GALAXY; python scripts/grt/export.py -l debug -``grt.py`` connects to your galaxy database and makes queries against the +``export.py`` connects to your galaxy database and makes queries against the database for three primary tables: - job @@ -99,9 +99,9 @@ Data Submission .. code-block:: console - cd $GALAXY; python scripts/grt/grt-submit.py + cd $GALAXY; python scripts/grt/upload.py -``scripts/grt/grt-submit.py`` is a script which will submit your data to the +``scripts/grt/upload.py`` is a script which will submit your data to the configured GRT server. You must first be registered with the server which will also walk you through the setup process. diff --git a/scripts/grt/grt.py b/scripts/grt/export.py similarity index 100% rename from scripts/grt/grt.py rename to scripts/grt/export.py diff --git a/scripts/grt/grt-submit.py b/scripts/grt/upload.py similarity index 100% rename from scripts/grt/grt-submit.py rename to scripts/grt/upload.py