diff --git a/test-data/454Score.png b/test-data/454Score.png index 189dea2c6f2..98b01e702dc 100644 Binary files a/test-data/454Score.png and b/test-data/454Score.png differ diff --git a/tools/metag_tools/short_reads_figure_score.py b/tools/metag_tools/short_reads_figure_score.py index c3d73ea9ef8..50e1ccde9df 100644 --- a/tools/metag_tools/short_reads_figure_score.py +++ b/tools/metag_tools/short_reads_figure_score.py @@ -62,9 +62,9 @@ def merge_to_20_datapoints( score ): return score_points def __main__(): - + invalid_lines = 0 - + infile_score_name = sys.argv[1].strip() outfile_R_name = sys.argv[2].strip() @@ -153,7 +153,6 @@ def __main__(): number_of_points = 20 else: number_of_points = read_length - read_length_threshold = 100 # minimal read length for 454 file score_points = [] score_matrix = [] @@ -180,7 +179,6 @@ def __main__(): big = 0 tmp_array.append( big ) score_points.append( tmp_array ) - elif seq_method == '454': # skip the last fasta sequence score = ''