Updated "Example" images shown at the bottom of many
"Operate on Genomic Invervals" tool pages. Old onew were looking dated. New ones look, well, newer, and cover more cases.
Dave Clements
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@@ -36,6 +36,10 @@ See Galaxy Interval Operation Screencasts_ (right click to open this link in ano
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.. _Screencasts: http://wiki.g2.bx.psu.edu/Learn/Interval%20Operations
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**Example**
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.. image:: ./static/operation_icons/gops_baseCoverage.gif
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</help>
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</tool>
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</tool>
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@@ -82,9 +82,15 @@ See Galaxy Interval Operation Screencasts_ (right click to open this link in ano
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-----
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**Example**
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**Examples**
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.. image:: ./static/operation_icons/gops_cluster.gif
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Find Clusters:
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.. image:: ./static/operation_icons/gops_clusterFind.gif
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Merge Clusters:
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.. image:: ./static/operation_icons/gops_clusterMerge.gif
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</help>
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</tool>
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</tool>
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@@ -129,9 +129,15 @@ See Galaxy Interval Operation Screencasts_ (right click to open this link in ano
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-----
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**Example**
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**Examples**
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.. image:: ./static/operation_icons/gops_intersect.gif
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Overlapping Intervals:
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.. image:: ./static/operation_icons/gops_intersectOverlappingIntervals.gif
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Overlapping Pieces of Intervals:
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.. image:: ./static/operation_icons/gops_intersectOverlappingPieces.gif
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</help>
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</tool>
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</tool>
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@@ -92,48 +92,26 @@ See Galaxy Interval Operation Screencasts_ (right click to open this link in ano
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-----
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**Example**
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**Examples**
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If **First dataset** is::
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.. image:: ./static/operation_icons/gops_joinRecordsList.gif
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chr1 10 100 Query1.1
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chr1 500 1000 Query1.2
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chr1 1100 1250 Query1.3
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Only records that are joined (inner join):
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and **Second dataset** is::
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.. image:: ./static/operation_icons/gops_joinInner.gif
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chr1 20 80 Query2.1
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chr1 2000 2204 Query2.2
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chr1 2500 3000 Query2.3
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All records of first dataset:
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.. image:: ./static/operation_icons/gops_joinLeftOuter.gif
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The four return options will generate:
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All records of second dataset:
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.. image:: ./static/operation_icons/gops_joinRightOuter.gif
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- **Return only records that are joined**::
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All records of both datasets:
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chr1 10 100 Query1.1 chr1 20 80 Query2.1
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.. image:: ./static/operation_icons/gops_joinFullOuter.gif
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- **Return all records of first dataset**::
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chr1 10 100 Query1.1 chr1 20 80 Query2.1
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chr1 500 1000 Query1.2 . . . .
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chr1 1100 1250 Query1.3 . . . .
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- **Return all records of second dataset**::
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chr1 10 100 Query1.1 chr1 20 80 Query2.1
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. . . . chr1 2000 2204 Query2.2
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. . . . chr1 2500 3000 Query2.3
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- **Return all records of both datasets**::
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chr1 10 100 Query1.1 chr1 20 80 Query2.1
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chr1 500 1000 Query1.2 . . . .
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chr1 1100 1250 Query1.3 . . . .
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. . . . chr1 2000 2204 Query2.2
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. . . . chr1 2500 3000 Query2.3
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</help>
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</tool>
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</tool>
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@@ -112,7 +112,13 @@ See Galaxy Interval Operation Screencasts_ (right click to open this link in ano
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**Example**
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.. image:: ./static/operation_icons/gops_subtract.gif
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Intervals with no overlap:
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.. image:: ./static/operation_icons/gops_subtractOverlappingIntervals.gif
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Non-overlapping pieces of intervals:
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.. image:: ./static/operation_icons/gops_subtractOverlappingPieces.gif
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</help>
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</tool>
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</tool>
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