Merge API GalaxyInteractorTestCase into integration test

This seems more appropraite as an integration test.
This commit is contained in:
mvdbeek
2021-09-23 19:05:30 +02:00
parent 66fd430763
commit 97c5bd8771
5 changed files with 15 additions and 28 deletions
+2 -2
View File
@@ -184,9 +184,9 @@ def integration_module_instance(clazz):
return pytest.fixture(scope='module')(_instance)
def integration_tool_runner(tool_ids, tool_version=None):
def integration_tool_runner(tool_ids):
def test_tools(instance, tool_id):
instance._run_tool_test(tool_id, tool_version=tool_version)
instance._run_tool_test(tool_id)
return pytest.mark.parametrize("tool_id", tool_ids)(test_tools)
@@ -1,7 +1,7 @@
<tool id="multiple_versions" name="multiple_versions" version="0.1">
<command>
echo "Version 0.1" > $out_file1
</command>
<command><![CDATA[
echo "Version 0.1" > '$out_file1'
]]></command>
<inputs>
<param name="inttest" value="1" type="integer" />
</inputs>
@@ -1,7 +1,7 @@
<tool id="multiple_versions" name="multiple_versions" version="0.2">
<command>
echo "Version 0.2" &gt; $out_file1
</command>
<command><![CDATA[
echo "Version 0.2" > '$out_file1'
]]></command>
<inputs>
<param name="inttest" value="1" type="integer"/>
</inputs>
@@ -1,22 +1,22 @@
# Test galaxy interactor
"""Integration tests for GalaxyInteractor."""
from packaging.version import Version
from galaxy_test.base.populators import skip_without_tool
from ._framework import ApiTestCase
from galaxy_test.driver import integration_util
class GalaxyInteractorBackwardCompatTestCase(ApiTestCase):
class GalaxyInteractorTestCase(integration_util.IntegrationTestCase):
framework_tool_and_types = True
def test_local_test_data_download(self):
self.galaxy_interactor._target_galaxy_version = Version("18.09")
assert self.galaxy_interactor.supports_test_data_download is False
assert self.galaxy_interactor.test_data_download(tool_id='cat1', filename='1.bed').startswith(b'chr1\t147962192\t147962580')
def test_run_test_select_version(self):
self._run_tool_test(tool_id='multiple_versions', tool_version="0.1")
class GalaxyInteractorTestCase(ApiTestCase):
@skip_without_tool("multiple_versions")
def test_get_tool_tests(self):
# test that get_tool_tests will return the right tests when the tool_version has a '+' in it
test_data = self.galaxy_interactor.get_tool_tests(tool_id="multiple_versions", tool_version="0.1+galaxy6")
@@ -1,13 +0,0 @@
"""Integration tests for the Pulsar embedded runner."""
from galaxy_test.driver import integration_util
class ToolTestIntegrationInstance(integration_util.IntegrationInstance):
"""Describe a Galaxy test instance with embedded pulsar configured."""
framework_tool_and_types = True
instance = integration_util.integration_module_instance(ToolTestIntegrationInstance)
test_tools = integration_util.integration_tool_runner(['multiple_versions'], tool_version='0.1')