Supress pysam binary incompatibility warning when using datatypes in binary.py.

This commit is contained in:
Daniel Blankenberg
2015-05-11 15:04:09 -04:00
parent 539df779d9
commit 830b9f4d35
+6 -2
View File
@@ -12,6 +12,7 @@ import struct
import subprocess
import tempfile
import re
import warnings
import zipfile
from galaxy import eggs
@@ -24,8 +25,11 @@ from galaxy.datatypes.metadata import MetadataElement, MetadataParameter, ListPa
from galaxy.datatypes import metadata
import dataproviders
eggs.require( "pysam" )
from pysam import csamtools
with warnings.catch_warnings():
warnings.simplefilter( "ignore" )
eggs.require( "pysam" )
from pysam import csamtools
log = logging.getLogger(__name__)