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Merge pull request #14696 from galaxybot/dev_auto_update_dependencies

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Update Python dependencies
This commit is contained in:
Nicola Soranzo
2022-09-24 08:31:00 +01:00
committed by GitHub
parent e4636cead0 24b32f226a
commit 65d1183b95
3 changed files with 15 additions and 15 deletions
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lib/galaxy/dependencies/dev-requirements.txt
+4 -4
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@@ -1,6 +1,6 @@
--extra-index-url https://wheels.galaxyproject.org/simple
aiohttp==3.8.1 ; python_version >= "3.7" and python_version < "3.11"
aiohttp==3.8.3 ; python_version >= "3.7" and python_version < "3.11"
aiosignal==1.2.0 ; python_version >= "3.7" and python_version < "3.11"
alabaster==0.7.12 ; python_version >= "3.7" and python_version < "3.11"
amqp==5.1.1 ; python_version >= "3.7" and python_version < "3.11"
@@ -33,7 +33,7 @@ defusedxml==0.7.1 ; python_version >= "3.7" and python_version < "3.11"
deprecated==1.2.13 ; python_version >= "3.7" and python_version < "3.11"
docutils==0.16 ; python_version >= "3.7" and python_version < "3.11"
fluent-logger==0.10.0 ; python_version >= "3.7" and python_version < "3.11"
fonttools==4.37.2 ; python_version >= "3.7" and python_version < "3.11"
fonttools==4.37.3 ; python_version >= "3.7" and python_version < "3.11"
frozenlist==1.3.1 ; python_version >= "3.7" and python_version < "3.11"
future==0.18.2 ; python_version >= "3.7" and python_version < "3.11"
h11==0.12.0 ; python_version >= "3.7" and python_version < "3.11"
@@ -77,7 +77,7 @@ py==1.11.0 ; python_version >= "3.7" and python_version < "3.11"
pycparser==2.21 ; python_version >= "3.7" and python_version < "3.11"
pygithub==1.55 ; python_version >= "3.7" and python_version < "3.11"
pygments==2.13.0 ; python_version >= "3.7" and python_version < "3.11"
pyjwt==2.4.0 ; python_version >= "3.7" and python_version < "3.11"
pyjwt==2.5.0 ; python_version >= "3.7" and python_version < "3.11"
pynacl==1.5.0 ; python_version >= "3.7" and python_version < "3.11"
pyparsing==3.0.9 ; python_version >= "3.7" and python_version < "3.11"
pysocks==1.7.1 ; python_version >= "3.7" and python_version < "3.11"
@@ -92,7 +92,7 @@ pytest-postgresql==4.1.1 ; python_version >= "3.7" and python_version < "3.11"
pytest-shard==0.1.2 ; python_version >= "3.7" and python_version < "3.11"
pytest==7.1.3 ; python_version >= "3.7" and python_version < "3.11"
python-dateutil==2.8.2 ; python_version >= "3.7" and python_version < "3.11"
python-irodsclient==1.1.4 ; python_version >= "3.7" and python_version < "3.11"
python-irodsclient==1.1.5 ; python_version >= "3.7" and python_version < "3.11"
pytz==2022.2.1 ; python_version >= "3.7" and python_version < "3.11"
rdflib==6.0.2 ; python_version >= "3.7" and python_version < "3.11"
recommonmark==0.7.1 ; python_version >= "3.7" and python_version < "3.11"
lib/galaxy/dependencies/pinned-lint-requirements.txt
+3 -3
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@@ -1,6 +1,6 @@
attrs==22.1.0
flake8==5.0.4
flake8-bugbear==22.9.11
flake8-bugbear==22.9.23
importlib-metadata==4.2.0
mccabe==0.7.0
mypy==0.971
@@ -15,12 +15,12 @@ types-contextvars==2.4.7
types-cryptography==3.3.23
types-dataclasses==0.6.6
types-docutils==0.19.1
types-Markdown==3.4.1
types-Markdown==3.4.2
types-paramiko==2.11.6
types-pkg-resources==0.1.3
types-python-dateutil==2.8.19
types-PyYAML==6.0.11
types-requests==2.28.10
types-requests==2.28.11
types-six==1.16.19
types-urllib3==1.26.24
typing_extensions==4.3.0
lib/galaxy/dependencies/pinned-requirements.txt
+8 -8
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@@ -3,7 +3,7 @@
a2wsgi==1.6.0 ; python_version >= "3.7" and python_version < "3.11"
adal==1.2.7 ; python_version >= "3.7" and python_version < "3.11"
aiofiles==22.1.0 ; python_version >= "3.7" and python_version < "3.11"
aiohttp==3.8.1 ; python_version >= "3.7" and python_version < "3.11"
aiohttp==3.8.3 ; python_version >= "3.7" and python_version < "3.11"
aiosignal==1.2.0 ; python_version >= "3.7" and python_version < "3.11"
alembic==1.8.1 ; python_version >= "3.7" and python_version < "3.11"
amqp==5.1.1 ; python_version >= "3.7" and python_version < "3.11"
@@ -66,7 +66,7 @@ galaxy2cwl==0.1.4 ; python_version >= "3.7" and python_version < "3.11"
gravity==0.13.5 ; python_version >= "3.7" and python_version < "3.11"
greenlet==1.1.3 ; python_version >= "3.7" and (platform_machine == "aarch64" or platform_machine == "ppc64le" or platform_machine == "x86_64" or platform_machine == "amd64" or platform_machine == "AMD64" or platform_machine == "win32" or platform_machine == "WIN32") and python_version < "3.11"
gunicorn==20.1.0 ; python_version >= "3.7" and python_version < "3.11"
gxformat2==0.15.0 ; python_version >= "3.7" and python_version < "3.11"
gxformat2==0.16.0 ; python_version >= "3.7" and python_version < "3.11"
h11==0.12.0 ; python_version >= "3.7" and python_version < "3.11"
h5py==3.7.0 ; python_version >= "3.7" and python_version < "3.11"
humanfriendly==10.0 ; python_version >= "3.7" and python_version < "3.11"
@@ -82,12 +82,12 @@ kombu==5.2.4 ; python_version >= "3.7" and python_version < "3.11"
lagom==1.7.1 ; python_version >= "3.7" and python_version < "3.11"
lockfile==0.12.2 ; python_version >= "3.7" and python_version < "3.11"
lxml==4.9.1 ; python_version >= "3.7" and python_version < "3.11"
mako==1.2.2 ; python_version >= "3.7" and python_version < "3.11"
mako==1.2.3 ; python_version >= "3.7" and python_version < "3.11"
markdown==3.4.1 ; python_version >= "3.7" and python_version < "3.11"
markupsafe==2.1.1 ; python_version >= "3.7" and python_version < "3.11"
mercurial==6.2.2 ; python_version >= "3.7" and python_version < "3.11"
mistune==0.8.4 ; python_version >= "3.7" and python_version < "3.11"
mrcfile==1.4.2 ; python_version >= "3.7" and python_version < "3.11"
mrcfile==1.4.3 ; python_version >= "3.7" and python_version < "3.11"
msgpack==1.0.4 ; python_version >= "3.7" and python_version < "3.11"
multidict==6.0.2 ; python_version >= "3.7" and python_version < "3.11"
mypy-extensions==0.4.3 ; python_version >= "3.7" and python_version < "3.11"
@@ -118,7 +118,7 @@ pydot==1.4.2 ; python_version >= "3.7" and python_version < "3.11"
pyeventsystem==0.1.0 ; python_version >= "3.7" and python_version < "3.11"
pyfaidx==0.7.1 ; python_version >= "3.7" and python_version < "3.11"
pygments==2.13.0 ; python_version >= "3.7" and python_version < "3.11"
pyjwt==2.4.0 ; python_version >= "3.7" and python_version < "3.11"
pyjwt==2.5.0 ; python_version >= "3.7" and python_version < "3.11"
pykwalify==1.8.0 ; python_version >= "3.7" and python_version < "3.11"
pylibmagic==0.2.1 ; python_version >= "3.7" and python_version < "3.11"
pynacl==1.5.0 ; python_version >= "3.7" and python_version < "3.11"
@@ -134,7 +134,7 @@ python-multipart==0.0.5 ; python_version >= "3.7" and python_version < "3.11"
python3-openid==3.2.0 ; python_version >= "3.7" and python_version < "3.11"
pytz==2022.2.1 ; python_version >= "3.7" and python_version < "3.11"
pyyaml==6.0 ; python_version >= "3.7" and python_version < "3.11"
pyzmq==24.0.0 ; python_version >= "3.7" and python_version < "3.11"
pyzmq==24.0.1 ; python_version >= "3.7" and python_version < "3.11"
rdflib==6.0.2 ; python_version >= "3.7" and python_version < "3.11"
refgenconf==0.12.2 ; python_version >= "3.7" and python_version < "3.11"
repoze-lru==0.7 ; python_version >= "3.7" and python_version < "3.11"
@@ -158,13 +158,13 @@ sortedcontainers==2.4.0 ; python_version >= "3.7" and python_version < "3.11"
sqlalchemy-migrate==0.13.0 ; python_version >= "3.7" and python_version < "3.11"
sqlalchemy==1.4.41 ; python_version >= "3.7" and python_version < "3.11"
sqlitedict==2.0.0 ; python_version >= "3.7" and python_version < "3.11"
sqlparse==0.4.2 ; python_version >= "3.7" and python_version < "3.11"
sqlparse==0.4.3 ; python_version >= "3.7" and python_version < "3.11"
starlette-context==0.3.4 ; python_version >= "3.7" and python_version < "3.11"
starlette==0.20.4 ; python_version >= "3.7" and python_version < "3.11"
supervisor==4.2.4 ; python_version >= "3.7" and python_version < "3.11"
svgwrite==1.4.3 ; python_version >= "3.7" and python_version < "3.11"
tempita==0.5.2 ; python_version >= "3.7" and python_version < "3.11"
tenacity==8.0.1 ; python_version >= "3.7" and python_version < "3.11"
tenacity==8.1.0 ; python_version >= "3.7" and python_version < "3.11"
tifffile==2021.11.2 ; python_version >= "3.7" and python_version < "3.11"
tinydb==4.7.0 ; python_version >= "3.7" and python_version < "3.11"
tornado==6.2 ; python_version >= "3.7" and python_version < "3.11"