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Removing accidentally leftover test line from Tophat wrapper
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@@ -180,7 +180,6 @@ def __main__():
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# Copy SAM File.
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shutil.copyfile( tmp_output_dir + "/accepted_hits.sam", options.accepted_hits_output_file )
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shutil.copyfile(tmp_output_dir + "/accepted_hits.sam", '/afs/bx.psu.edu/user/kpvincent/galaxy-commit/tophat_out.sam')
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except Exception, e:
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stop_err( 'Error in tophat:\n' + str( e ) )
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finally:
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