From 531c100548dee0535d7721693bac0813519103d1 Mon Sep 17 00:00:00 2001 From: Kelly Vincent Date: Thu, 26 Aug 2010 10:29:31 -0400 Subject: [PATCH] Removing accidentally leftover test line from Tophat wrapper --- tools/ngs_rna/tophat_wrapper.py | 1 - 1 file changed, 1 deletion(-) diff --git a/tools/ngs_rna/tophat_wrapper.py b/tools/ngs_rna/tophat_wrapper.py index a7cba128b74..8fe5c001413 100644 --- a/tools/ngs_rna/tophat_wrapper.py +++ b/tools/ngs_rna/tophat_wrapper.py @@ -180,7 +180,6 @@ def __main__(): # Copy SAM File. shutil.copyfile( tmp_output_dir + "/accepted_hits.sam", options.accepted_hits_output_file ) - shutil.copyfile(tmp_output_dir + "/accepted_hits.sam", '/afs/bx.psu.edu/user/kpvincent/galaxy-commit/tophat_out.sam') except Exception, e: stop_err( 'Error in tophat:\n' + str( e ) ) finally: