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Merge pull request #6986 from nsoranzo/release_18.05_backport_2d36e8955e020958334088d6ba5853c1027d8b75

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[18.05] Backport commit 2d36e8955e
This commit is contained in:
Martin Cech
2018-11-07 15:50:20 -05:00
committed by GitHub
parent 6da5157181 4760a0ac0f
commit 45e475e19a
1 changed files with 2 additions and 2 deletions
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lib/galaxy/datatypes/util/gff_util.py
+2 -2
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@@ -188,7 +188,7 @@ class GFFReaderWrapper(NiceReaderWrapper):
if not self.seed_interval:
while not self.seed_interval:
try:
self.seed_interval = GenomicIntervalReader.next(self)
self.seed_interval = super(GenomicIntervalReader, self).__next__()
except ParseError as e:
handle_parse_error(e)
# TODO: When no longer supporting python 2.4 use finally:
@@ -215,7 +215,7 @@ class GFFReaderWrapper(NiceReaderWrapper):
feature_intervals.append(self.seed_interval)
while True:
try:
interval = GenomicIntervalReader.next(self)
interval = super(GenomicIntervalReader, self).__next__()
raw_size += len(self.current_line)
except StopIteration as e:
# No more intervals to read, but last feature needs to be