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Merge pull request #889 from bgruening/ROOT_DIR_fix

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fix for strange package names
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Björn Grüning
2015-10-11 09:58:50 +02:00
parent 858eed632a a6efdc5a2b
commit 19f574939d
1 changed files with 1 additions and 1 deletions
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lib/tool_shed/galaxy_install/tool_dependencies/recipe/step_handler.py
+1 -1
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@@ -999,7 +999,7 @@ class SetEnvironment( RecipeStep ):
cmds = install_environment.environment_commands( 'set_environment' )
env_var_dicts = action_dict.get( 'environment_variable', [] )
root_dir_dict = dict( action='set_to',
name='%s_ROOT_DIR' % tool_dependency.name.upper(),
name='%s_ROOT_DIR' % tool_dependency.name.replace( '-', '_' ).upper(),
value=install_environment.install_dir )
env_var_dicts.append( root_dir_dict )
for env_var_dict in env_var_dicts: