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Matthias Bernt
e725f421b4
fixes #16947 also adds a setter to `MockApp` in order to fix the following which was shown during tests ``` /home/berntm/projects/galaxy/.venv/lib/python3.10/site-packages/_pytest/threadexception.py:73: PytestUnhandledThreadExceptionWarning: Exception in thread Thread-7 (check) Traceback (most recent call last): File "/usr/lib/python3.10/threading.py", line 1016, in _bootstrap_inner self.run() File "/usr/lib/python3.10/threading.py", line 953, in run self._target(*self._args, **self._kwargs) File "/home/berntm/projects/galaxy/lib/galaxy/tool_util/toolbox/watcher.py", line 153, in check self.reload_callback() File "/home/berntm/projects/galaxy/lib/galaxy/app_unittest_utils/toolbox_support.py", line 44, in <lambda> app.watchers.tool_config_watcher.reload_callback = lambda: reload_callback(test_case) File "/home/berntm/projects/galaxy/lib/galaxy/app_unittest_utils/toolbox_support.py", line 193, in reload_callback test_case._toolbox = test_case.app.toolbox = SimplifiedToolBox(test_case) AttributeError: can't set attribute 'toolbox' warnings.warn(pytest.PytestUnhandledThreadExceptionWarning(msg)) ```
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Galaxy Quickstart
=================
Galaxy requires Python 3.8 . To check your Python version, run:
.. code:: console
$ python -V
Python 3.8.18
Start Galaxy:
.. code:: console
$ sh run.sh
Once Galaxy completes startup, you should be able to view Galaxy in your
browser at: http://localhost:8080
For more installation details please see: https://getgalaxy.org/
Documentation is available at: https://docs.galaxyproject.org/
Tutorials on how to use Galaxy, perform scientific analyses with it, develop Galaxy and its tools, and admin a Galaxy server are at: https://training.galaxyproject.org/
Tools
=====
Tools can be either installed from the Tool Shed or added manually.
For details please see the `tutorial <https://galaxyproject.org/admin/tools/add-tool-from-toolshed-tutorial/>`__.
Note that not all dependencies for the tools provided in the
``tool_conf.xml.sample`` are included. To install them please visit
"Manage dependencies" in the admin interface.
Issues and Galaxy Development
=============================
Please see `CONTRIBUTING.md <CONTRIBUTING.md>`_ .