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galaxy/tools/emboss_5
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Greg Von Kuster e263c8bb06 Forgot to eliminate the emboss path...
2008-04-25 19:07:26 +00:00
..
emboss_antigenic.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_backtranseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_banana.pl
2007-12-11 16:19:53 +00:00
emboss_banana.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_biosed.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_btwisted.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_cai_custom.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_cai.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_chaos.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_charge.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_checktrans.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_chips.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_cirdna.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_codcmp.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_coderet.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_compseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_cpgplot_wrapper.pl
Fix for EMBOSS 5 cpgplot tool.
2008-04-25 19:05:56 +00:00
emboss_cpgplot.xml
Forgot to eliminate the emboss path...
2008-04-25 19:07:26 +00:00
emboss_cpgreport.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_cusp.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_cutseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_dan.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_degapseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_descseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_diffseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_digest.xml
2 more emboss wrapper bug fixes.
2008-04-04 20:27:26 +00:00
emboss_dotmatcher.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_dotpath.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_dottup.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_dreg.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_einverted.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_epestfind.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_equicktandem.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_est2genome.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_etandem.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_extractfeat.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_extractseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_format_corrector.py
Committing EMBOSS v5 tools: epestfind, est2genome extractseq freak fuzzpro garnier geecee
2007-12-17 14:02:48 +00:00
emboss_freak.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_fuzznuc.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_fuzzpro.xml
2 more emboss wrapper bug fixes.
2008-04-04 20:27:26 +00:00
emboss_fuzztran.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_garnier.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_geecee.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_getorf.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_helixturnhelix.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_hmoment.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_iep.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_infoseq_wrapper.pl
Adding EMBOSS tools version 5.0 for helixturnhelix, hmoment, iep infoseq lindna and associated test files
2007-12-17 14:10:03 +00:00
emboss_infoseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_isochore.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_lindna.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_marscan.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_maskfeat.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_maskseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_matcher.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_megamerger.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_merger.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_msbar.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_multiple_outputfile_wrapper.pl
Committing EMBOSS v5.0 tools marscan maskfeat maskseq matcher megamerger merger and associated test files.
2007-12-17 14:16:37 +00:00
emboss_needle.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_newcpgreport.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_newcpgseek.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_newseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_noreturn.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_notseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_nthseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_octanol.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_oddcomp.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_palindrome.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pasteseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_patmatdb.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pepcoil.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pepinfo.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pepnet.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pepstats.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pepwheel.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pepwindow.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_pepwindowall.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_plotcon.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_plotorf.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_polydot.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_preg.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_prettyplot.xml
Fix for EMBOSS prettyplot, -title command line parameter flag should be -gtitle
2008-04-03 14:26:29 +00:00
emboss_prettyseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_primersearch.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_revseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_seqmatchall.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_seqret.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_showfeat.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_shuffleseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_sigcleave.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_single_outputfile_wrapper.pl
Adding EMBOSS v5.0 tools seqret showfeat shuffleseq sigcleave sixpack skipseq supermatcher syco
2007-12-17 14:35:58 +00:00
emboss_sirna.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_sixpack.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_skipseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_splitter.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_supermatcher.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_syco.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_tcode.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_textsearch.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_tmap.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_tranalign.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_transeq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_trimest.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_trimseq.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_twofeat.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_union.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_vectorstrip.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_water.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_wobble.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_wordcount.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00
emboss_wordmatch.xml
Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.
2008-01-24 20:37:12 +00:00