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https://github.com/galaxyproject/galaxy.git
synced 2026-09-22 06:16:50 +08:00
Daniel Blankenberg
b2e2b801ea
greater than config.output_size_limit, no data will be retrieved and an error message will be provided to the user. Tools using this script have been updated to provide the max file size on the command line. Resolves ticket #93.
27 lines
1.2 KiB
XML
27 lines
1.2 KiB
XML
<?xml version="1.0"?>
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<tool name="Wormbase" id="wormbase" tool_type="data_source" URL_method="post">
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<description>server</description>
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<command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>
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<inputs action="http://www.wormbase.org/db/seq/gbgff/c_elegans/" check_values="false" target="_top">
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<display>go to Wormbase server $GALAXY_URL</display>
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<param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=wormbase" />
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</inputs>
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<request_param_translation>
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<request_param galaxy_name="URL" remote_name="URL" missing="">
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<add_to_url>
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<param_from_source name="d" missing="" />
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<param_from_source name="dbkey" missing="" />
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<param_from_source name="q" missing="" />
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<param_from_source name="s" missing="" />
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<param_from_source name="t" missing="" />
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</add_to_url>
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</request_param>
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<request_param galaxy_name="data_type" remote_name="data_type" missing="txt" />
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</request_param_translation>
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<uihints minwidth="800"/>
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<outputs>
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<data name="output" format="txt" />
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</outputs>
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<options sanitize="False" refresh="True"/>
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</tool>
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