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mvdbeek
bcd8690a2f
The lazy dispatch jobs set use_lazy_toolbox=true but left LazyTool in its permissive default, where an off-surface attribute read materialises the tool with only a WARN log. An accidental whole-toolbox sweep (a new caller iterating toolbox.tools() and touching an un-forwarded attr) would therefore degrade lazy mode to O(N) tool parses without failing CI. Set LAZY_TOOL_STRICT=1 in the lazy dispatch env so those reads raise NotImplementedError instead, turning any such regression into a hard failure on the lazy run. Legitimate materialisation (to_dict, the execution path) goes through _materialize() directly and is unaffected. Claude-Session: https://claude.ai/code/session_018L7ZmCv2ubKA3JNeSL8Pkr
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:alt: Galaxy Logo
The latest information about Galaxy can be found on the `Galaxy Community Hub <https://galaxyproject.org/>`__.
Community support is available at `Galaxy Help <https://help.galaxyproject.org/>`__.
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Galaxy Quickstart
=================
Galaxy requires Python 3.10 or higher. To check your Python version, run:
.. code:: console
$ python -V
Python 3.10.12
Start Galaxy:
.. code:: console
$ sh run.sh
Once Galaxy completes startup, you should be able to view Galaxy in your
browser at: http://localhost:8080
For more installation details please see: https://getgalaxy.org/
Documentation is available at: https://docs.galaxyproject.org/
Tutorials on how to use Galaxy, perform scientific analyses with it, develop Galaxy and its tools, and admin a Galaxy server are at: https://training.galaxyproject.org/
Tools
=====
Tools can be either installed from the Tool Shed or added manually.
For details please see the `tutorial <https://galaxyproject.org/admin/tools/add-tool-from-toolshed-tutorial/>`__.
Note that not all dependencies for the tools provided in the
``tool_conf.xml.sample`` are included. To install them please visit
"Manage dependencies" in the admin interface.
Issues and Galaxy Development
=============================
Please see `CONTRIBUTING.md <CONTRIBUTING.md>`_ .