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20 lines
572 B
Python
20 lines
572 B
Python
# for GTOOL linkage ped to marchini snptest format
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from galaxy import datatypes
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def exec_before_job(app, inp_data, out_data, param_dict, tool=None):
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"""Sets the name of the data"""
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job_name = param_dict.get( 'o', 'Marchini' )
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log = ['txt','%s_rgGTOOL_report.log' % job_name,'txt']
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lookup={}
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lookup['logf'] = log
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for name in lookup.keys():
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data = out_data[name]
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data_type,newname,ext = lookup[name]
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data = app.datatypes_registry.change_datatype(data, data_type)
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data.name = newname
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out_data[name] = data
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