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29 lines
833 B
Python
29 lines
833 B
Python
from galaxy import app
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import os, string, time
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def timenow():
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"""return current time as a string
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"""
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return time.strftime('%d/%m/%Y %H:%M:%S', time.localtime(time.time()))
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def exec_after_process(app, inp_data, out_data, param_dict, tool, stdout, stderr):
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name,data = out_data.items()[0]
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basename = param_dict['title']
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basename = basename.encode()
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killme = string.punctuation + string.whitespace
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trantab = string.maketrans(killme,'_'*len(killme))
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title = basename.translate(trantab)
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info = '%s filtered by rgClean.py at %s' % (title,timenow())
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data.change_datatype('pbed')
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data.file_name = data.file_name
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data.metadata.base_name = title
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data.name = '%s.pbed' % title
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data.info = info
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data.readonly = True
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app.model.context.flush()
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