galaxy

special_topics

Add Hashicorp Vault token renewal support

2026-03-30 12:27:04 +02:00

_inc_proxy_prereq.md

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_inc_proxy_serving_root.md

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_inc_proxy_ssl.md

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ai_agents.md

Per-agent max_tokens defaults via DEFAULT_MAX_TOKENS class attribute

2026-05-03 09:20:15 -04:00

apache.md

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authentication.md

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carbon_emissions.md

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cluster.md

add walltime handling to htcondor, adding tests

2026-05-08 00:00:08 +02:00

conda_faq.rst

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config_logging.rst

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config-template-secrets-create.png

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config-template-secrets-edit.png

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config.rst

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container_resolvers.rst

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data_tables.md

doc: add missing value examples and Flux XML filter example

2026-04-17 12:16:53 +02:00

data.md

fixes after review

2026-04-09 17:20:51 +10:00

db_migration.md

Add documentation on handling a deadlock error during db migration

2025-02-05 15:03:33 -05:00

dependency_resolvers.rst

Add support for hierarchical module systems in lmod + modules dependency resolvers

2025-09-05 09:04:31 +02:00

dropbox_callback.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

dropbox_client_creds.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

dropbox_create_app_options_1.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

dropbox_create_button.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

dropbox_scopes.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

enable_headers_in_fetch_requests.md

Adds docs for enabling HTTP headers in fetch

2026-01-27 11:31:35 +01:00

file_source_azure_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_azure_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_dropbox_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_dropbox_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_elabftw_configuration_template.png

Set writable: true in file source template for eLabFTW

2025-02-13 15:33:56 +01:00

file_source_elabftw_configuration.png

Set writable: true in file source template for eLabFTW

2025-02-13 15:33:56 +01:00

file_source_ftp_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_ftp_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_invenio_configuration_template.png

Add InvenioRDM file source configuration documentation and templates

2025-02-17 13:44:19 +01:00

file_source_invenio_configuration.png

Add InvenioRDM file source configuration documentation and templates

2025-02-17 13:44:19 +01:00

file_source_posix_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_posix_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_rspace_configuration_template.png

Implement file source to integrate Galaxy with RSpace

2025-05-09 12:04:46 +02:00

file_source_rspace_configuration.png

Implement file source to integrate Galaxy with RSpace

2025-05-09 12:04:46 +02:00

file_source_s3fs_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_s3fs_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_templates.png

Implement file source to integrate Galaxy with RSpace

2025-05-09 12:04:46 +02:00

file_source_webdav_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_webdav_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

file_source_zenodo_configuration_template.png

Add Zenodo file source template documentation

2025-02-19 10:36:33 +01:00

file_source_zenodo_configuration.png

Add Zenodo file source template documentation

2025-02-19 10:36:33 +01:00

framework_dependencies.rst

Replace poetry with uv

2024-10-31 10:22:52 +00:00

ga4gh.md

Implement GA4GH WES API with task logs & comprehensive test coverage

2026-01-20 13:54:01 -05:00

galaxy_options.rst

Collapse SSE feature flags into single enable_sse_updates

2026-04-28 19:15:24 +02:00

gen_diagrams.py

Use `os.path.join() or pathlib.Path` instead of f-strings for filesystem paths

2026-02-27 19:48:46 +00:00

index.rst

Add admin docs for SSE-driven real-time updates

2026-04-28 19:15:24 +02:00

job_metrics.rst

Support setting and displaying timezone with the core metrics plugin

2025-05-06 11:45:51 -04:00

jobs.md

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migrating_to_gunicorn.md

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mq.md

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nginx.md

Add admin docs for SSE-driven real-time updates

2026-04-28 19:15:24 +02:00

object_store_aws_s3_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_aws_s3_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_azure_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_azure_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_boto3_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_boto3_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_disk_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_disk_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_generic_s3_configuration_template.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_generic_s3_configuration.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

object_store_templates.png

Allow oauth2 file sources with Dropbox initial implementation.

2024-10-14 15:16:41 +02:00

options.rst

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production.md

Document per-user rate limiting and concurrency limiting in production guide

2026-04-07 14:47:36 +02:00

proxy_package_layout.rst

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python.md

Drop support for Python 3.9

2026-01-19 18:39:16 +00:00

reports_options.rst

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reports.rst

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s3_configuration_template.png

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s3_configuration.png

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scaling.md

Add admin docs for SSE-driven real-time updates

2026-04-28 19:15:24 +02:00

search_for_new_screenshots.py

Implement file source to integrate Galaxy with RSpace

2025-05-09 12:04:46 +02:00

security.md

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sse_updates.md

Add admin docs for SSE-driven real-time updates

2026-04-28 19:15:24 +02:00

tool_panel.rst

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useful_scripts.rst

Add warning, gxadmin script ref to script, docs

2025-05-09 12:19:16 +02:00

user_defined_tools.md

narrow YAML tool parameter schema for UserToolSource

2026-04-15 15:36:56 -04:00

user_file_source_form_full_aws_public.png

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user_file_source_form_full_azure.png

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user_file_source_form_full_elabftw.png

Update eLabFTW file source template docs

2025-02-17 13:10:32 +01:00

user_file_source_form_full_ftp.png

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user_file_source_form_full_invenio.png

Add InvenioRDM file source configuration documentation and templates

2025-02-17 13:44:19 +01:00

user_file_source_form_full_rspace.png

Implement file source to integrate Galaxy with RSpace

2025-05-09 12:04:46 +02:00

user_file_source_form_full_webdav.png

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user_file_source_form_full_zenodo.png

Add Zenodo file source template documentation

2025-02-19 10:36:33 +01:00

user_object_store_form_full_aws_s3.png

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user_object_store_form_full_azure.png

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user_object_store_form_full_gcp_s3_interop.png

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