Jeremy Goecks 0c00e50a54 Move implementation of from_work_dir attribute from job finish to job command line so that outputs are available earlier. This provides compatibility of attribute when setting metadata externally. Update Tophat wrapper to act as exemplar for attribute use.

2012-07-20 13:18:54 -04:00

..

galaxy

Move implementation of from_work_dir attribute from job finish to job command line so that outputs are available earlier. This provides compatibility of attribute when setting metadata externally. Update Tophat wrapper to act as exemplar for attribute use.

2012-07-20 13:18:54 -04:00

galaxy_utils

Add basic VCF4.1 support.

2011-08-30 16:56:52 -04:00

fpconst.py

Cleaning up modules. Still a few stragglers that can't be easily eggified.

2006-11-15 18:27:21 +00:00

log_tempfile.py

Since tempfiles seem to occasionally be left behind, allow logging of

2008-12-23 13:28:27 -05:00

mimeparse.py

Collapsed changeset: Trackster plugged into galaxy with behind-the-scenes indexing of Wiggle, coverage and interval datasets.

2009-03-11 00:29:01 +00:00

pkg_resources.py

Add numpy egg, update bx_python egg (now with 100% more numpy) and include code that allows scrambling to depend on other eggs existing and being importable.

2010-03-15 14:35:35 -04:00

psyco_full.py

Cleaning up modules. Still a few stragglers that can't be easily eggified.

2006-11-15 18:27:21 +00:00