mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-31 02:28:09 +08:00
mvdbeek
9574de30f6
uwsgi options are returned as bytestring, so this avoids:
```
Traceback (most recent call last):
File "lib/galaxy/webapps/galaxy/buildapp.py", line 12, in <module>
import galaxy.app
File "lib/galaxy/app.py", line 8, in <module>
import galaxy.model
File "lib/galaxy/model/__init__.py", line 45, in <module>
import galaxy.exceptions
File "lib/galaxy/exceptions/__init__.py", line 19, in <module>
from ..exceptions import error_codes
File "lib/galaxy/exceptions/error_codes.py", line 9, in <module>
from galaxy.util import unicodify
File "lib/galaxy/util/__init__.py", line 1708, in <module>
executable = _executable()
File "lib/galaxy/util/__init__.py", line 1700, in _executable
exe = os.path.join(virtualenv, 'bin', 'python')
File "/Users/mvandenb/src/galaxy/.venv3/lib/python3.6/posixpath.py", line 94, in join
genericpath._check_arg_types('join', a, *p)
File "/Users/mvandenb/src/galaxy/.venv3/lib/python3.6/genericpath.py", line 151, in _check_arg_types
raise TypeError("Can't mix strings and bytes in path components") from None
TypeError: Can't mix strings and bytes in path components
```
Broken in https://github.com/galaxyproject/galaxy/commit/891daf4f82eb45c692f3fc5542cea35f94e10118
.. figure:: https://galaxyproject.org/images/galaxy-logos/galaxy_project_logo.jpg
:alt: Galaxy Logo
The latest information about Galaxy can be found on the `Galaxy Community Hub <https://galaxyproject.org/>`__.
Community support is available at `Galaxy Help <https://help.galaxyproject.org/>`__.
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:target: https://webchat.freenode.net/?channels=galaxyproject
:alt: Chat on irc
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:target: https://gitter.im/galaxyproject/Lobby
:alt: Chat on gitter
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:target: https://docs.galaxyproject.org/en/master/
:alt: Release Documentation
.. image:: https://travis-ci.org/galaxyproject/galaxy.svg?branch=dev
:target: https://travis-ci.org/galaxyproject/galaxy
:alt: Inspect the test results
Galaxy Quickstart
=================
Galaxy requires Python 2.7 To check your python version, run:
.. code:: console
$ python -V
Python 2.7.3
Start Galaxy:
.. code:: console
$ sh run.sh
Once Galaxy completes startup, you should be able to view Galaxy in your
browser at:
http://localhost:8080
Configuration & Tools
=====================
You may wish to make changes from the default configuration. This can be
done in the ``config/galaxy.ini`` file.
Tools can be either installed from the Tool Shed or added manually.
For details please see the `tutorial <https://galaxyproject.org/admin/tools/add-tool-from-toolshed-tutorial/>`__.
Note that not all dependencies for the tools provided in the
``tool_conf.xml.sample`` are included. To install them please visit
"Manage dependencies" in the admin interface.
Issues and Galaxy Development
=============================
Please see `CONTRIBUTING.md <CONTRIBUTING.md>`_ .
Roadmap
=============================
Interested in the next steps for Galaxy? Take a look at the `roadmap <https://github.com/galaxyproject/galaxy/projects/8>`__.