galaxy

Bug fix for extracting workflows from a history that has a dataset in the error state.

2010-06-18 15:20:42 -04:00

configure_menu.mako

Workflows (owned and shared) can now be added to the tool menu.

2008-07-17 22:14:40 -04:00

display.mako

Allow display framework to work with workflows that contain tools that have been updated. Previously, this would cause a server error when trying to view a workflow or a page with an embedded workflow that contained an updated tool.

2010-11-09 17:20:36 -05:00

edit_attributes.mako

Added functionality to insert links to pages, datasets, and workflows into pages; button images are not done yet, however. Also refactored grid code to use shared columns defined in controller.py, replaced tabs with spaces in mako files, and made change to show right panel for all shared items regardless of whether they are published.

2010-02-03 11:27:21 -05:00

editor_generic_form.mako

Fix bug that was preventing annotation of workflow input datasets.

2010-05-06 17:52:49 -04:00

editor_tool_form.mako

tool_form: Make radio and select box labels explicitly inline. Workflow: add colons after parameter names where appropriate. Fixes #419

2010-11-16 12:49:35 -05:00

editor.mako

Workflows:

2011-06-08 15:30:40 -04:00

embed.mako

Fixes to item embedding in pages. In particular, fixed the editor color changes that were occurring when moving the cursor through embedded items.

2010-03-16 12:00:10 -04:00

export.mako

(1) Added templates for downloading/exporting objects and (2) created 'Download or Export' option for workflows that enables users to download a workflow to a file or export a workflow to myExperiment.

2010-09-10 17:37:13 -04:00

index.mako

Decouple the masthead from base_panels.mako.

2010-03-31 13:11:05 -04:00

item_content.mako

Rudimentary support for embedding of histories, datasets, and workflows into pages. Specifics: (1) added menus for inserting links to galaxy items and for embedding items to page editor; (2) framework code for producing HTML for embedded items on page display; and (3) toggling to display/hide embedded item content.

2010-02-12 16:45:37 -05:00

list_for_run.mako

Fix more unicode issues when listing and running workflows.

2010-10-20 16:10:37 -04:00

list_published.mako

Make published items set the "Shared Data" tab as the active tab

2010-10-07 15:33:54 -04:00

list.mako

Fix a few XSS issues in workflow/history

2011-05-25 11:31:26 +02:00

myexp_export_content.mako

Framework support for importing and exporting Galaxy workflows to and from myExperiment. This commit is part of a larger effort to integrate myExperiment support into Galaxy, and it is the first piece of this effort.

2010-08-12 13:57:45 -04:00

myexp_export.mako

Framework support for importing and exporting Galaxy workflows to and from myExperiment. This commit is part of a larger effort to integrate myExperiment support into Galaxy, and it is the first piece of this effort.

2010-08-12 13:57:45 -04:00

rename.mako

Support for sharing workflows (as well as renaming). A shared workflow is

2008-07-14 01:56:50 +00:00

run_complete.mako

Run a workflow on a selection of multiple inputs, one invocation for each.

2011-04-14 01:04:40 +02:00

run.mako

Workflow Parameter bugfix for the case when a parameter isn't used in

2011-04-14 23:40:19 -04:00

sharing.mako

Enhancements and fixes for sharing framework: (a) sharing/publishing webpages can now be displayed in frames; (b) sharing webpages can display messages; (c) workflow sharing highlights correct tab; (d) history sharing for individual users now uses sharing framework; (e) item sharing with individual users now uses common template.

2010-08-16 17:05:59 -04:00