Daniel Blankenberg 04cb164c1f Special case genomespace file browser import tool's handling of GenomeSpace format identifier 'http://www.genomespace.org/datamanager/dataformat/unknown' to cause datatype auto-dection via sniff with a fallback to using filename extention.

2014-01-09 10:54:58 -05:00

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annotation_profiler

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data_destination

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data_source

Fix outdated usage of states in microbial dataset post-job hook.

2013-10-10 12:53:10 -04:00

discreteWavelet

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encode

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evolution

Migrate tools from the distribution to the tool shed, including but not limited to samtools and fastx_toolkit tools.

2013-09-26 10:05:00 -04:00

extract

Rev slightly the tool version of extract_genomic_dna.xml since output is slightly different.

2013-10-25 00:06:14 -04:00

fasta_tools

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fastq

Merged in jmchilton/galaxy-central-fork-1 (pull request #259)

2013-12-17 10:42:49 -05:00

filters

Backed out changeset 9532e80796ec

2013-11-07 13:02:22 -05:00

gatk

Enhance GATK tools to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

genomespace

Special case genomespace file browser import tool's handling of GenomeSpace format identifier 'http://www.genomespace.org/datamanager/dataformat/unknown' to cause datatype auto-dection via sniff with a fallback to using filename extention.

2014-01-09 10:54:58 -05:00

hyphy

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maf

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meme

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metag_tools

Enhance megablast to utilize GALAXY_SLOTS configuration when available.

2013-11-05 13:46:06 -06:00

multivariate_stats

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mutation

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new_operations

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next_gen_conversion

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ngs_rna

Enhance trinity to utilize GALAXY_SLOTS configuration when available.

2013-11-16 00:52:36 +01:00

ngs_simulation

Prevent no choice in multiple selections.

2013-09-18 14:43:59 +02:00

peak_calling

remove binary dependency

2013-11-11 15:35:45 +01:00

phenotype_association

Migrate tools from the distribution to the tool shed, including but not limited to samtools and fastx_toolkit tools.

2013-09-26 10:05:00 -04:00

plotting

Merged in abrenner/galaxy-central (pull request #215)

2013-10-16 22:12:40 -05:00

regVariation

Migrate tools from the distribution to the tool shed, including but not limited to samtools and fastx_toolkit tools.

2013-09-26 10:05:00 -04:00

rgenetics

Remove unused test-data/rtestouts

2013-10-14 21:43:32 +11:00

solid_tools

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sr_assembly

Add <version_command>.

2013-12-20 10:58:08 +01:00

sr_mapping

Fix for failure preparing job: "NotFound: cannot find 'mfl'" with paired-end library.

2013-12-06 11:20:56 +01:00

stats

Backed out changeset 9532e80796ec

2013-11-07 13:02:22 -05:00

taxonomy

Fix reference to 'Fetch taxonomic representation' tool.

2013-09-18 14:44:42 +02:00

validation

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vcf_tools

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visualization

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