galaxy

fonts

Ui: Update Fontawesome, ToolForm: Add tool version handling

2014-12-10 01:54:26 -05:00

fugue

Add icon to get from Trackster to Circster.

2012-07-15 19:02:59 -04:00

history-buttons

style: convert all sprite generation to use spritesmith, everything is now in less and built by grunt

2013-08-31 18:51:22 -04:00

history-states

style: convert all sprite generation to use spritesmith, everything is now in less and built by grunt

2013-08-31 18:51:22 -04:00

jstree

initial implementation of UI, API and flow for importing from Galaxy user directories, introduces jstree browser into the project, includes refactoring of some library API methods into common managers

2014-09-08 14:27:49 -04:00

maf_icons

Scaling images. Changes to icons illustrating functionality of maf tools

2007-07-19 02:43:34 +00:00

silk

Implement UI multi batch workflow inputs.

2013-02-23 01:14:22 -06:00

tools/lda

Modify tools contributed by Chungoo Park (cxp440@psu.edu) for Linear Discriminant Analysis, and drawing Receiver Operating Characteristic plots; add a new tool to 'Generate A Matrix for using PC and LDA'; remove redundant 'Principal Component Analysis' tool.

2010-07-16 14:52:52 -04:00

tracks

Trackster: introduce collections of tracks. Track 'groups' can be created and tracks can be added or removed from groups. Currently groups do not have a dropdown menu and cannot be saved.

2011-08-26 17:45:50 -04:00

visualization

trackster: allow line track height to be resized (hover over track, control appears at bottom right). TODO: needs to be saved with track config.

2011-01-30 23:44:57 -05:00

yui

1) Workflow changes

2007-10-30 05:44:08 +00:00

add_icon_dark.png

Image files for tagging UI

2009-08-27 16:27:10 -04:00

add_icon.png

Image files for tagging UI

2009-08-27 16:27:10 -04:00

aggregate_history1.png

score aggregate tool for .wig files

2007-01-22 20:28:36 +00:00

aggregate_history2.png

score aggregate tool for .wig files

2007-01-22 20:28:36 +00:00

Armitagep_manhattan.png

work around for composite objects without a base_name in grouping.py

2010-05-11 18:02:39 -04:00

Armitagep_qqplot.png

work around for composite objects without a base_name in grouping.py

2010-05-11 18:02:39 -04:00

bar_chart.png

Bar chart tool for use with taxonomy tools. Requires gnuplot and gnuplot.py. Still needs interface testing

2008-03-10 21:57:32 +00:00

bed_warn.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

closebox.png

A slightly better closing icon for screencast overlays

2010-02-10 15:13:46 -05:00

dat_points_table_brows_1.png

score aggregate tool for .wig files

2007-01-22 20:28:36 +00:00

ddarrowsplit.png

Fix various popup button issues. When there is no popup, button will be correctly sized (no extra space on right). When there is only a popup, entire button area is clickable. Combo buttons are mostly unchanged except that the popup click area is larger (anything to the right of the separator bar. An image is used so the arrow has a consistent shape and size across browsers.

2009-12-14 12:17:01 -05:00

delete_tag_icon_gray.png

Image files for tagging UI

2009-08-27 16:27:10 -04:00

delete_tag_icon_white.png

Image files for tagging UI

2009-08-27 16:27:10 -04:00

delete.gif

Add a ratings framework so that users can rate shared items. All sharable items--histories, workflows, datasets, visualizations, and pages--can be rated. Main framework components are (1) database tables for storing ratings; (2) UsesItemRatings mixin that supports rating items and obtaining an item's average rating; (3) controller methods to handle rating asynchronously; and (4) jQuery star rating plugin and supporting code that enables interactive item rating. (2) and (4) can be reused in the community space.

2010-08-03 11:45:25 -04:00

documents-stack-faded.png

Faded document stack icon.

2011-04-13 16:46:36 -04:00

documents-stack.png

Bugfix for workflow run not reloading history, icon for document stack.

2011-04-13 16:35:08 -04:00

dropdownarrow.png

Easier to see "new workflow" link in small window sizes. Proper dropdown arrow. Fixes #149

2009-09-24 19:58:35 -04:00

dw.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

fetchTax.png

Changes to taxonomy fetches and two new datatypes: taxonomy and newick

2008-03-04 20:30:26 +00:00

galaxyIcon_noText.png

include new logo in the new release

2015-04-29 14:43:06 -04:00

hatch-023858.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

hatch-fade-023858.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

histogram2.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

histogram.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

history_down_arrow.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

history_up_arrow.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

history.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_error_lrg.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_error_sml.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_info_lrg.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_info_sml.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_success_lrg.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_success_sml.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_warning_lrg.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

icon_warning_sml.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

kendall.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

light_gray_grid.gif

1) Workflow changes

2007-10-30 05:44:08 +00:00

loading_large_white_bg.gif

Workflow editor updates. Many UI improvements.

2007-10-19 02:55:45 +00:00

loading_small_white_bg.gif

Workflow editor updates. Many UI improvements.

2007-10-19 02:55:45 +00:00

mag_glass.png

Tweaks to grid filter UI: (1) added search image/submit button for initiating search and (2) styled text filter criteria.

2009-11-18 11:51:09 -05:00

mutation_visualization_example.png

Mutation visualization tool

2010-08-12 14:21:59 -04:00

openid-16x16.gif

OpenID support for Galaxy.

2010-11-17 10:13:42 -05:00

overview_arrows.png

Overview improvements:

2009-08-06 14:43:51 -04:00

pearson.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

resizable.png

Overview improvements:

2009-08-06 14:43:51 -04:00

rgWebLogo3_test.jpg

Adding two new tool wrappers and tests - clustalw (http://www.clustal.org ) for multiple alignments and a sequence motif generator based on weblogo3 (http://weblogo.berkeley.edu ) which works on fasta files such as alignments from clustalw

2011-03-22 14:08:32 -04:00

scatter.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

scatterplot.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

select2-spinner.gif

Use the select2 library for large select boxes rather than our custom

2013-02-01 16:49:16 -05:00

select2.png

Select2 fix

2015-02-23 12:50:27 -05:00

select2x2.png

Select2 fix

2015-02-23 12:50:27 -05:00

solid_qual.png

Second pass of help and interface updates. Not done yet...

2009-09-22 08:59:36 -04:00

spearman.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

square_empty.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

square_error.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

square_ok.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

square_queued.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

square_running.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

star.gif

Add a ratings framework so that users can rate shared items. All sharable items--histories, workflows, datasets, visualizations, and pages--can be rated. Main framework components are (1) database tables for storing ratings; (2) UsesItemRatings mixin that supports rating items and obtaining an item's average rating; (3) controller methods to handle rating asynchronously; and (4) jQuery star rating plugin and supporting code that enables interactive item rating. (2) and (4) can be reused in the community space.

2010-08-03 11:45:25 -04:00

thumbtack_icon_dark.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

thumbtack_icon.png

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

tipsy.gif

Update tooltips using a modified version of tipsy, these can be used on any page if you include the tipsy script. Also, updating some styles and icons for tags.

2010-02-09 04:16:26 -05:00

tool_menu_down_arrow.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

up.gif

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00