Nicola Soranzo 1d17a29c79 Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

..

genebed_maf_to_fasta.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

interval2maf_pairwise.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

interval2maf.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

interval2maf.xml

Remove remaining references to galaxy.eggs . flake8 some files in tools/ .

2015-10-26 19:29:13 +00:00

interval_maf_to_merged_fasta.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

interval_maf_to_merged_fasta.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

macros.xml

Add annotated citations for MAF tools.

2014-08-06 09:41:38 -04:00

maf_by_block_number.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_by_block_number.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

maf_filter.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_filter.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

maf_limit_size.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_limit_size.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

maf_limit_to_species.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_limit_to_species.xml

Make tool version explicit (Job runner would assume 1.0.0)

2015-03-09 15:21:48 +00:00

maf_reverse_complement.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_reverse_complement.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

maf_split_by_species.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_split_by_species.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

maf_stats.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_stats.xml

Remove numpy requirement, not used since commit 09ce7a9b17 .

2015-05-15 12:41:08 +01:00

maf_thread_for_species.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_thread_for_species.xml

Make tool version explicit (Job runner would assume 1.0.0)

2015-03-09 15:21:48 +00:00

maf_to_bed_code.py

Fix import order and Python3 compatibility for tools/

2016-09-29 19:26:22 +01:00

maf_to_bed.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_to_bed.xml

Make tool version explicit (Job runner would assume 1.0.0)

2015-03-09 15:21:48 +00:00

maf_to_fasta_concat.py

Fix import order and Python3 compatibility for tools/

2016-09-29 19:26:22 +01:00

maf_to_fasta_multiple_sets.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_to_fasta.xml

dos2unix of tools/ directory. Some whitespace and PEP-8 fixes.

2015-05-15 12:40:52 +01:00

maf_to_interval.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

maf_to_interval.xml

Make tool version explicit (Job runner would assume 1.0.0)

2015-03-09 15:21:48 +00:00

vcf_to_maf_customtrack.py

Fixes for pycodestyle 2.2.0

2016-11-15 16:56:50 +00:00

vcf_to_maf_customtrack.xml

Make tool version explicit (Job runner would assume 1.0.0)

2015-03-09 15:21:48 +00:00