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Nuwan Goonasekera
5663a29a5a
Downloading a dataset from a remote (S3-like) object store blocks a web thread while the whole object is pulled into the local cache before any bytes are sent, causing 504 timeouts on large files and making objects larger than the cache undownloadable. Add an opt-in `enable_direct_download` flag per object store backend. When set, plain whole-file downloads are served by redirecting the client (302) to a short-lived presigned URL generated by the backing store, removing Galaxy from the download path entirely. - ObjectStore.get_direct_download_url() gates on the flag and forwards content-disposition/content-type into the presigned URL so the client receives the right filename; implemented for boto3, s3, and azure. - DatasetsService.display() returns a redirect for non-archive whole-file download requests; previews, chunked display, extra-files access, and composite/archived downloads continue to stream as before. - The single-file-vs-archive decision is shared with the existing streamed-download path via Data.is_archive_download(). Refs galaxyproject/galaxy#19255
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The latest information about Galaxy can be found on the `Galaxy Community Hub <https://galaxyproject.org/>`__.
Community support is available at `Galaxy Help <https://help.galaxyproject.org/>`__.
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Galaxy Quickstart
=================
Galaxy requires Python 3.10 or higher. To check your Python version, run:
.. code:: console
$ python -V
Python 3.10.12
Start Galaxy:
.. code:: console
$ sh run.sh
Once Galaxy completes startup, you should be able to view Galaxy in your
browser at: http://localhost:8080
For more installation details please see: https://getgalaxy.org/
Documentation is available at: https://docs.galaxyproject.org/
Tutorials on how to use Galaxy, perform scientific analyses with it, develop Galaxy and its tools, and admin a Galaxy server are at: https://training.galaxyproject.org/
Tools
=====
Tools can be either installed from the Tool Shed or added manually.
For details please see the `tutorial <https://galaxyproject.org/admin/tools/add-tool-from-toolshed-tutorial/>`__.
Note that not all dependencies for the tools provided in the
``tool_conf.xml.sample`` are included. To install them please visit
"Manage dependencies" in the admin interface.
Issues and Galaxy Development
=============================
Please see `CONTRIBUTING.md <CONTRIBUTING.md>`_ .