mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-08-31 01:02:04 +08:00
mvdbeek
534f60e927
Fixes
```
Traceback (most recent call last):
File "galaxy/web/framework/decorators.py", line 340, in decorator
rval = func(self, trans, *args, **kwargs)
File "galaxy/webapps/galaxy/api/tools.py", line 446, in build
return tool.to_json(trans, kwd.get("inputs", kwd), history=history)
File "galaxy/tools/__init__.py", line 2945, in to_json
tool_help = self.help.render(
File "mako/template.py", line 434, in render
return runtime._render(self, self.callable_, args, data)
File "mako/runtime.py", line 874, in _render
_render_context(
File "mako/runtime.py", line 916, in _render_context
_exec_template(inherit, lclcontext, args=args, kwargs=kwargs)
File "mako/runtime.py", line 943, in _exec_template
callable_(context, *args, **kwargs)
File "memory:0x7fd82e70d0f0", line 22, in render_body
AttributeError: 'Undefined' object has no attribute 'name'
```
for https://github.com/galaxyproject/tools-iuc/blob/main/tools/teloscope/teloscope.xml#L220
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:alt: Galaxy Logo
The latest information about Galaxy can be found on the `Galaxy Community Hub <https://galaxyproject.org/>`__.
Community support is available at `Galaxy Help <https://help.galaxyproject.org/>`__.
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Galaxy Quickstart
=================
Galaxy requires Python 3.9 or higher. To check your Python version, run:
.. code:: console
$ python -V
Python 3.9.21
Start Galaxy:
.. code:: console
$ sh run.sh
Once Galaxy completes startup, you should be able to view Galaxy in your
browser at: http://localhost:8080
For more installation details please see: https://getgalaxy.org/
Documentation is available at: https://docs.galaxyproject.org/
Tutorials on how to use Galaxy, perform scientific analyses with it, develop Galaxy and its tools, and admin a Galaxy server are at: https://training.galaxyproject.org/
Tools
=====
Tools can be either installed from the Tool Shed or added manually.
For details please see the `tutorial <https://galaxyproject.org/admin/tools/add-tool-from-toolshed-tutorial/>`__.
Note that not all dependencies for the tools provided in the
``tool_conf.xml.sample`` are included. To install them please visit
"Manage dependencies" in the admin interface.
Issues and Galaxy Development
=============================
Please see `CONTRIBUTING.md <CONTRIBUTING.md>`_ .