Files
galaxy/scripts/api/workflow_import_from_file_rpark.py
T
Nicola Soranzo d85db9daa6 Use __file__ when adding paths to sys.path instead of os.getcwd() .
Also insert additional paths in position 1 unless strictly necessary.
2016-02-18 15:45:15 +00:00

32 lines
787 B
Python

#!/usr/bin/env python
"""
python rpark_import_workflow_from_file.py 35a24ae2643785ff3d046c98ea362c7f http://localhost:8080/api/workflows/import 'spp_submodule.ga'
python rpark_import_workflow_from_file.py 35a24ae2643785ff3d046c98ea362c7f http://localhost:8080/api/workflows/import 'spp_submodule.ga'
"""
import json
import os
import sys
from common import submit
def openWorkflow(in_file):
with open(in_file) as f:
temp_data = json.load(f)
return temp_data
try:
assert sys.argv[2]
except IndexError:
print 'usage: %s key url [name] ' % os.path.basename( sys.argv[0] )
sys.exit( 1 )
try:
data = {}
workflow_dict = openWorkflow(sys.argv[3])
data['workflow'] = workflow_dict
except IndexError:
pass
submit( sys.argv[1], sys.argv[2], data )