Greg Von Kuster 37eeb64f61 Added tool version directory hierarchy for some tools in the filters tool directory.

2008-02-22 14:57:00 +00:00

..

data_source

Added blurb to Get ENCODE Data tools telling user data may not be current.

2008-01-14 21:39:11 +00:00

emboss

Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.

2008-01-24 20:37:12 +00:00

emboss_5

Added versions to EMBOSS tools, corrected tool ids in version 5 EMBOSS tools to be same as those in version 4, corrected a few functional tests for version 5 tools.

2008-01-24 20:37:12 +00:00

encode

Added tool version directory hierarchy for encode and extract tool directories.

2008-02-22 14:18:41 +00:00

extract

Added tool version directory hierarchy for encode and extract tool directories.

2008-02-22 14:18:41 +00:00

fasta_tools

Added tool version directory hierarchy for fasta_tools tool directory.

2008-02-22 14:31:30 +00:00

filters

Added tool version directory hierarchy for some tools in the filters tool directory.

2008-02-22 14:57:00 +00:00

hyphy

Minor modifications to HYPHY dN/dS tool.

2008-01-23 16:17:30 +00:00

maf

Forgot to import tempfile in maf_to_bed.py. Used when creating multiple

2008-02-05 16:37:49 +00:00

metag_tools

update several xml files for better help descriptions.

2008-02-05 18:32:42 +00:00

new_operations

Better exception handling in gops_cluster tool.

2008-02-21 14:26:50 +00:00

patmat

Changing all tools that use 'text' as file extension to now use 'txt'. We are eliminating the use of 'text' as a file extension within Galaxy and will now use only 'txt' for Text data types.

2007-09-27 12:24:27 +00:00

plotting

Bug fix in histogram tool.

2007-12-11 21:41:31 +00:00

regVariation

Modifications to Feature Coverage tool: Output format changed and test-data updated.

2008-01-25 22:19:57 +00:00

stats

Fix in gsummary.py - split on tab rather than white space.

2008-02-21 13:55:43 +00:00

validation

Cleanup: removing the cookbook package. Bunch and odict move to galaxy.util, tools

2007-07-31 15:45:59 +00:00

visualization

Modified "Build custom track" to work on Interval files without strand column.

2008-02-08 16:11:03 +00:00