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galaxy/display_applications/igb/wig.xml
T

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XML

<display id="igb_wig" version="1.0.0" name="display in IGB">
<link id="View" name="View">
<url>http://bioviz.org/igb/galaxy.html?version=${wig_file.dbkey}&amp;${position}&amp;loadresidues=false&amp;feature_url_0=${wig_file.url}&amp;sym_name_0=${niceName}&amp;sym_method_0=${wig_file.url}&amp;query_url=${wig_file.url}&amp;server_url=galaxy</url>
<param type="data" name="wig_file_for_name" viewable="False"/>
<param type="template" name="niceName" viewable="False" strip="True">
#import re
#set nm=$wig_file_for_name.name
${re.sub('\W',"_",nm)}
</param>
<param type="data" name="wig_file" url="${niceName}.wig" />
<param type="template" name="position" strip="True" >
#set chrom, start, end = $wig_file.datatype.get_estimated_display_viewport( $wig_file )
#if $chrom is not None:
seqid=${chrom}&amp;start=${start}&amp;end=${int(end) + 1}
#else:
seqid=&amp;start=&amp;end=
#end if
</param>
</link>
</display>