Guruprasad Anada 1e1474fdde Adding HYPHY tool to compute dN/dS ratio.

2007-07-11 20:05:20 +00:00

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data_source

Biomart fixes: better handling of max data size, applied data type sniffer.

2007-07-05 20:16:53 +00:00

emboss

Fix for EMBOSS:fuzztran change in commandline parameters.

2007-07-02 16:06:33 +00:00

encode

Fix for random_intervals and other tools using bx.intervals.io.GenomicIntervalReader.

2007-07-02 15:28:46 +00:00

extract

Better message display behavior in phastOdds_for_intervals tool.

2007-07-06 14:59:46 +00:00

filters

Fix for random_intervals and other tools using bx.intervals.io.GenomicIntervalReader.

2007-07-02 15:28:46 +00:00

hyphy

Adding HYPHY tool to compute dN/dS ratio.

2007-07-11 20:05:20 +00:00

new_operations

Fix a typo in cluster tool.

2007-07-02 17:20:14 +00:00

patmat

modification for no chromosome is selected

2007-07-06 15:53:52 +00:00

plotting

Many changes related to tool interfaces and jobs (DATABASE CHANGE, READ)

2007-05-19 16:40:55 +00:00

stats

Forgot to add tool_conf.xml.sample. Also adding a small change to the tool code file.

2007-07-05 16:51:53 +00:00

validation

Changed trans->app.

2007-05-31 20:31:28 +00:00

visualization

rollback. sorry, removed the wrong files

2007-06-04 14:18:13 +00:00