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mvdbeek
05ede4ab0e
Planemo calls `verify_tool` with a maxseconds value,
and then sets `tool_test_dict.setdefault("maxseconds", maxseconds)`,
which fails, since we are serializing and already setting the default
maxseconds while parsing the test dict.
Fixes the IUC tool test timeouts not working when testing against 24.2.
Broken in
https://github.com/galaxyproject/galaxy/commit/9695ccc3c45a14b36beccfbaac69036a5ac65c21#diff-06835be1d1943ebce8373e2cd1f8e86c7b7813b720398850c978b734dd29e2daR1390
(maxseconds was prviously not serialized at all in
`ToolTestDescription.to_dict`)
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The latest information about Galaxy can be found on the `Galaxy Community Hub <https://galaxyproject.org/>`__.
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Galaxy Quickstart
=================
Galaxy requires Python 3.8 or higher. To check your Python version, run:
.. code:: console
$ python -V
Python 3.8.18
Start Galaxy:
.. code:: console
$ sh run.sh
Once Galaxy completes startup, you should be able to view Galaxy in your
browser at: http://localhost:8080
For more installation details please see: https://getgalaxy.org/
Documentation is available at: https://docs.galaxyproject.org/
Tutorials on how to use Galaxy, perform scientific analyses with it, develop Galaxy and its tools, and admin a Galaxy server are at: https://training.galaxyproject.org/
Tools
=====
Tools can be either installed from the Tool Shed or added manually.
For details please see the `tutorial <https://galaxyproject.org/admin/tools/add-tool-from-toolshed-tutorial/>`__.
Note that not all dependencies for the tools provided in the
``tool_conf.xml.sample`` are included. To install them please visit
"Manage dependencies" in the admin interface.
Issues and Galaxy Development
=============================
Please see `CONTRIBUTING.md <CONTRIBUTING.md>`_ .