Dannon Baker
565f11f142
Merge branch 'lib-refactor-cleanup' into dev
2016-03-30 09:43:19 -04:00
Martin Cech
971b987f0b
libraries: fetch nondeleted only first to speed up
...
fetch the deleted only when specifically requested
2016-03-29 12:38:21 -04:00
Martin Cech
5def7ee035
refactor rest of JS templates;
...
move all text outside of the fontawesome spans
convert console. calls to Galaxy.emit calls
2016-03-29 12:38:21 -04:00
guerler
9f0ddf57bb
Revise input wrapper, add test cases
2016-03-29 12:02:10 -04:00
Martin Cech
ee0a65bf13
fix duplication of select2 entries
...
leverage caching
2016-03-28 11:08:23 -04:00
guerler
d0f7ce260d
Add workflow content selectors and test cases
2016-03-27 16:18:29 -04:00
guerler
f70df22060
Upgrade content selector, add test cases
2016-03-27 16:18:26 -04:00
Dannon Baker
3240c20a4b
Swap analyse to analyze to be consistent.
2016-03-25 17:12:24 -04:00
Martin Cech
ce1b9aeb38
minor adjustments to markup; improve logging; repack
2016-03-25 15:54:26 -04:00
Martin Cech
87ea37ca28
add 'create history &import to it' feature
...
various refactorings and fixes to UX glitches
2016-03-25 15:24:23 -04:00
Martin Cech
ab31bd9f48
move text out of icon spans for library dataset view
...
also re-touch the html to be better readable
2016-03-24 13:12:02 -04:00
John Chilton
35403f2a91
Merge pull request #1970 from martenson/select-all-from-history
...
libraries: provide select all/none options when importing
2016-03-22 09:05:31 -04:00
Dannon Baker
35e75d11ce
Merge branch 'release_16.01' into dev.
...
Rebuild client.
2016-03-21 19:33:05 -04:00
Martin Cech
4b1b15aee8
libraries: provide select all/none options when importing
...
improve UX by using autofocus in modals
fix a bug with selecting all folder items and deleting
2016-03-21 17:26:01 -04:00
Daniel Blankenberg
e4e92e55ab
Fix typo: send-->sent
2016-03-21 14:18:56 -04:00
Martin Cech
50e5b08d7c
libraries: also show folder items paginator at the bottom of the items
2016-03-21 12:09:14 -04:00
guerler
bd0439d9b7
Fix tool access rights and forwarding
2016-03-18 20:12:21 -04:00
guerler
4976945ab0
Fix icon sizes
2016-03-15 17:21:21 -04:00
carlfeberhard
d9fc71510a
(merge conflicts)
2016-03-08 12:39:24 -05:00
John Chilton
36d85e81ee
Merge pull request #1843 from dannon/click_workflow_overview
...
Workflow editor overview click navigation
2016-03-08 09:04:27 -05:00
Dannon Baker
4cf9064358
Merge, rebuild client.
2016-03-07 17:55:04 -05:00
carlfeberhard
c15e5db2ec
(manually merge conflicts)
2016-03-07 16:15:38 -05:00
Dannon Baker
370ea10f75
Use real routes for tours, and make them actually work. Now it's
...
possible to open the tour index in a new tab, etc., instead of just
using javascript craziness.
2016-03-04 16:23:58 -05:00
carlfeberhard
22148c26c1
(merge conflicts)
2016-03-04 08:14:50 -05:00
John Chilton
e14e8a074c
Allow rerun of datasets new yet queued by job manager.
2016-03-04 09:14:29 +00:00
Dannon Baker
f2043a2142
rebuild client
2016-03-02 16:46:08 -05:00
Dannon Baker
517be33229
Block the extra click that happens just after drag-end; we don't want to move/recenter an additional time.
2016-03-02 16:03:09 -05:00
Dannon Baker
3241fe3cad
Click-to-center functionality for the workflow editor overview box.
2016-03-02 15:11:09 -05:00
guerler
d3b343acab
Use visit_inputs for check_and_update_param_values
2016-02-24 21:26:30 -05:00
carlfeberhard
7855e0009d
(merge conflicts)
2016-02-24 09:22:31 -05:00
carlfeberhard
3f15d5af21
UI, histories: rework update system to check contents based on update times of contents and only stop checking when history has no more running jobs
2016-02-24 09:20:24 -05:00
Nicola Soranzo
390d3b7eb7
Merge branch 'release_16.01' into dev
...
Conflicts:
static/scripts/bundled/analysis.bundled.js.map
static/scripts/bundled/libs.bundled.js
static/scripts/bundled/libs.bundled.js.map
2016-02-23 18:13:22 +00:00
John Chilton
dbab6f5b97
Workaround for #1739 - fixing up subworkflow inut connections.
...
Do the same relaxed thing we do for inputs of type 'input' as we do for outputs of this type. Someday we should have better tracking, but such a change is probably not wise for a release branch.
2016-02-22 21:46:03 +00:00
carlfeberhard
040fb8185b
Merge pull request #1751 from martenson/libraries-refactor
...
various libraries refactoring and bugfixes
2016-02-19 11:57:10 -05:00
guerler
89759a00c1
Remove DummyDataset
2016-02-18 17:41:41 -05:00
guerler
7ea4668ff7
Remove former populate_state
2016-02-18 17:41:38 -05:00
guerler
580895af1d
Revision
2016-02-18 17:40:30 -05:00
Nicola Soranzo
a0537762f2
Merge branch 'release_16.01' into dev
...
Conflicts:
static/scripts/bundled/analysis.bundled.js
static/scripts/bundled/analysis.bundled.js.map
static/scripts/bundled/libs.bundled.js.map
2016-02-18 19:52:23 +00:00
carlfeberhard
84de6b4ed3
Fix target or window.location when importing histories from display.mako (shared with me->view) to allow for iframes; silence popup-menu.js when menu is closed due to location change
2016-02-17 14:41:08 -05:00
Martin Cech
b50cf13379
refactor library dataset permissions API to use role manager
...
fix a bug in making dataset private (when you called it multiple
times it would always add a new datasetpermission)
various refactorings of JS and py
2016-02-17 11:59:00 -05:00
Martin Cech
e28f329008
add selects for dataset genome build and extension
...
minor stylistic fix for column width
2016-02-17 11:58:44 -05:00
Martin Cech
535b689cbc
style the toolbar of dataset view templates
2016-02-17 11:57:22 -05:00
Martin Cech
fcca59c70f
refactor; mainly the templates
2016-02-17 11:56:08 -05:00
Martin Cech
22e84e4814
repack client after merge conflicts
2016-02-09 13:31:30 -05:00
Martin Cech
db9c0b89ab
Merge release_16.01 into dev
2016-02-09 13:23:27 -05:00
Martin Cech
776180ab80
show all available information for current library and the opened folder
2016-02-09 10:24:02 -05:00
Martin Cech
308402235f
Merge release_16.01 into dev
2016-02-08 11:54:01 -05:00
Martin Cech
7867f3e083
accept json as input for setting permissions;
...
fix inconsistency by leveraging role_manager
2016-02-04 15:51:57 -05:00
Dannon Baker
ab5f153617
Clientside routing for tour kickoff, swapping from ?tour_id=foo approach.
2016-02-04 10:23:18 -05:00
Dannon Baker
61f168d34b
A slightly different check for Galaxy object definition that doesn't assume a window-attached Galaxy context, only a parent. Minor cleanup.
2016-02-04 10:19:26 -05:00
Dannon Baker