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Author SHA1 Message Date
John Chilton eeafa488ab Move zip collection workflow test into workflow framework tests 2024-07-29 09:19:10 -04:00
John Chilton dc14564b38 Replace API tests with workflow tests for various parameter replacement. 2024-07-29 09:19:09 -04:00
John Chilton a7ce90d168 Rework and improve workflow tests for tools with different versions. 2024-07-29 09:19:09 -04:00
John Chilton 4a7d75071d Migrate a workflow test case for output renaming to workflow test framework. 2024-07-29 09:19:09 -04:00
John Chilton 8697b61d45 Move empty sort workflow test into workflow test framework. 2024-07-29 09:19:09 -04:00
John Chilton ece5025f84 Test to verify/document behavior of mapping over multi-selects. 2024-07-29 09:19:09 -04:00
John Chilton f6fcc95099 Setup workflow test framework. 2024-07-29 09:19:09 -04:00
John Chilton fa9ca5ce10 Setup abstractions for Planemo & in-galaxy wf testing 2024-07-29 09:19:09 -04:00
Nicola Soranzo c1ce4d44bd Merge branch 'release_24.1' into dev 2024-07-29 12:50:21 +01:00
Nicola Soranzo 90b5251cb9 Merge branch 'release_24.0' into release_24.1 2024-07-29 12:48:29 +01:00
Nicola Soranzo 9191eee69c Merge pull request #18606 from mvdbeek/pin_weasyprint_version 
[24.0] Set minimum weasyprint version
 2024-07-29 09:48:23 +01:00
Marius van den Beek 1c5ca4a931 Merge pull request #18590 from jmchilton/test_parsing_work 
More tool test typing.
 2024-07-29 08:47:18 +02:00
Marius van den BeekandNicola Soranzo 69058114db Pin pydyf to < 0.11 
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2024-07-29 08:40:02 +02:00
Marius van den BeekandNicola Soranzo 0a637a5b02 Use python version syntax 
I don't think this works with our custom parsing, but worth a try.

Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2024-07-28 21:13:32 +02:00
mvdbeek 77efbaf792 Lower weasyprint versino pin and fix problematic transitive dependency 2024-07-28 13:17:28 +02:00
mvdbeek 67e89d943f Set minimum weasyprint version 
We're not pinning transitive conditional dependencies, and a new pydyf
version, which is a dependency of weasyprint, had a new release with a
breaking change, see (https://github.com/Kozea/WeasyPrint/issues/2200).

Newer releases of weasyprint have introduced max version pins, so I
think we're ok with just setting a minimum version here.
 2024-07-28 12:27:14 +02:00
Björn Grüning 543ad8b595 Merge pull request #18602 from davelopez/improve_update_user_api_schema 
Improve update user API payload schema
 2024-07-26 18:39:16 +02:00
davelopez 3f26f693ff Improve update user API payload schema 2024-07-26 16:53:52 +02:00
David López 65838aed0f Merge pull request #18265 from ahmedhamidawan/multiview_top_bar 
Move history multiview item actions to top
 2024-07-26 15:33:52 +02:00
davelopez 1dac9d96a7 Adapt HistoryView test 
To use updated message for permanently deleted history
 2024-07-26 10:19:08 +02:00
Björn Grüning 2231152fdc Merge pull request #18599 from davelopez/improve_notifications_api_types 
Tighten user notification API response types
 2024-07-26 09:32:47 +02:00
Ahmed Awan 9de0ee28cf add HistoryIndicators component 2024-07-25 11:45:44 -05:00
Ahmed AwanandDavid López f5cc111f9f replace purged with "permanently deleted" 
Co-authored-by: David López <46503462+davelopez@users.noreply.github.com>
 2024-07-25 11:07:28 -05:00
Ahmed Awan 3a69575588 add setNextAvailableHistoryId function 2024-07-25 11:06:57 -05:00
Ahmed Awan 3e0e9dcf64 move batch operations to history store; use api methods there 2024-07-25 11:06:57 -05:00
Ahmed Awan 95b7090360 make adjustments to DetailsLayout and other history structuring 
Move summarized type to its own file as well.
 2024-07-25 11:06:57 -05:00
Ahmed Awan 7b29122232 add purged/deleted/archived indicators for multiview items 2024-07-25 11:06:57 -05:00
Ahmed Awan 5f07fbcc6a histories grid: handle history total count change for store 2024-07-25 11:06:57 -05:00
Ahmed Awan c2a10b45a7 do not unpin a history when it is deleted 2024-07-25 11:06:57 -05:00
Ahmed Awan 6e9a7fcd4e modify delete history modal for already delete histories (purge) 
So that the dropdown item says "Purge this history" instead of delete for a history that is already deleted.
 2024-07-25 11:06:57 -05:00
Ahmed Awan dea3daf005 add faTimes icon to Hide button in multiview 2024-07-25 11:06:57 -05:00
Ahmed Awan 7aadb71991 hide annotation and tags if no pinned histories in multiview 2024-07-25 11:06:57 -05:00
Ahmed Awan c336828bb5 fix duplicate modals opening from HistoryNavigation 
Using `v-b-modal:modal-id` had the disadvantage that if we had multiple components containing modals with same ids, they would all open simultaneously. Using `v-modal` to open modals instead removes this side effect.
 2024-07-25 11:06:57 -05:00
Ahmed Awan 053caff131 move MultipleViewItem actions to top 
Add `HistoryNavigation` to the top section as well.

WIP: There is a bug right now that applies the dropdown action to all pinned histories in multiview (e.g.: You try to delete a history from the dropdown, but a modal opens up for each pinned history
 2024-07-25 11:06:57 -05:00
Ahmed Awan 6984b273ba fix details horizontal margins to align better in multiview 2024-07-25 11:06:57 -05:00
Ahmed Awan 88a46fd942 align multiview HistoryPanel details header based on content 
Adds a `pinnedHistoriesSummarizedStatus` computed ref to `historyStore` that Returns a string that indicates whether all the pinned histories have annotations, tags, both, or none of them. This is used to then adjust the `DetailsLayout` header height accordingly.
 2024-07-25 11:06:57 -05:00
davelopez 6d0beafca1 Tighten user notification API response types 
This will exclude "broadcast" as a possible user notification response.
 2024-07-25 17:58:36 +02:00
Marius van den Beek f15f028092 Merge pull request #18591 from dannon/fix-tool-tag-log 
[24.0] Fix sqlalchemy statement in tooltagmanager reset output
 2024-07-25 17:27:02 +02:00
mvdbeek 423c371268 Merge branch 'release_24.1' into dev 2024-07-25 17:24:42 +02:00
mvdbeek 9c507f2b2c Merge branch 'release_24.0' into release_24.1 2024-07-25 17:23:48 +02:00
mvdbeek b8cccdcef5 Merge branch 'release_23.2' into release_24.0 2024-07-25 17:21:58 +02:00
mvdbeek dacdfcc884 Merge branch 'release_23.1' into release_23.2 2024-07-25 17:18:08 +02:00
mvdbeek 7a5598b5a1 Merge branch 'release_23.0' into release_23.1 2024-07-25 17:03:28 +02:00
Marius van den Beek 8880273fe4 Merge pull request #18593 from itisAliRH/api-key-eye 
[23.0] Fix API key reveals on mouse hover
 2024-07-25 17:01:35 +02:00
Nicola Soranzo 1a0a706b60 Merge pull request #18553 from hujambo-dunia/fix-columnlist-datatype 
[24.0] Fix for not-null in 'column_list' object
 2024-07-25 12:56:08 +01:00
hujambo-duniaandNicola Soranzo c7e1cbfa32 Fix for not-null in 'column_list' object 
Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com>
 2024-07-24 17:00:00 -04:00
Dannon e18ba472bf Merge pull request #18589 from dannon/import-type-enforcement 
Consistent type imports, fixes and linting.
 2024-07-24 10:56:53 -04:00
John Chilton 119c3341ea Merge pull request #18575 from sanjaysrikakulam/update_file_source_templates_s3fs 
Add a new version of the production s3fs file source template with the writable configuration variable added
 2024-07-24 10:34:06 -04:00
Marius van den Beek 9757c33f0c Merge pull request #18570 from mvdbeek/sentry_group_cheetah_errors 
Group tool templating exceptions in sentry
 2024-07-24 16:33:29 +02:00
Alireza Heidari f745aa7906 ✨: add eye icon to reveal API key and remove mouse over in APIKeyItem 2024-07-24 11:29:40 +02:00