Commit Graph
60724 Commits
Author SHA1 Message Date
guerler e45acf8759 Remove jquery from window manager wrapper 2022-05-24 11:45:03 -04:00
guerler 59880bc07a Fix testing, routing and window ids in tour 2022-05-24 11:29:29 -04:00
guerler 4f6397f41e Adjust renaming in localization 2022-05-24 10:48:12 -04:00
guerler 4f1aae841c Fix button name, remove noscratchbook custom flag for now, fix margin 2022-05-24 10:20:11 -04:00
guerler 5b575303ec Takeover window manager styles, avoid masthead overlap 2022-05-24 09:44:37 -04:00
guerler b344ab20ee Fix naming, minor refactoring 2022-05-24 08:21:50 -04:00
Dannon Baker 15bb4ee051 Transpile winbox for jest 2022-05-24 08:14:55 -04:00
guerler 66653447a9 Use consistent naming for window manager plugin, fix unload warning 2022-05-24 08:01:26 -04:00
guerler b44eb915d0 Reduce button handling complexity (for now?) 2022-05-24 07:11:19 -04:00
guerler 439351b471 Remove custom buttons and tabular module from scratchbook handler for now 2022-05-23 14:29:20 -04:00
guerler babc6448d3 Remove jquery from multiview wrapper 2022-05-23 01:47:35 +02:00
guerler e1208aca8e Remove unused? trackster helper from multiview 2022-05-23 01:47:35 +02:00
guerler 1f5286cba3 Remove jquery helper and backbone model when loading datasets into multiview 2022-05-23 01:47:35 +02:00
guerler 9123087e02 Remove ui-frames custom window manager 2022-05-23 01:47:35 +02:00
guerler 4f2494a239 Add initial migration 2022-05-23 01:47:35 +02:00
guerler 851c28229c Add winbox plugin 2022-05-23 01:47:35 +02:00
Nicola Soranzo cfd421bd4a Merge pull request #13948 from galaxybot/dev_auto_update_dependencies
Update Python dependencies
2022-05-21 15:58:24 +01:00
galaxybot 54a9d57ffa Update Python dependencies 2022-05-21 03:18:49 +00:00
David López bc4f8041bf Merge pull request #13944 from jmchilton/galaxy_model_store_typing
Small code cleanup fixes to galaxy.model.store related code.
2022-05-20 20:41:57 +02:00
John Chilton 82f63e67d8 Small fixes to galaxy.model.stores. 2022-05-20 10:47:28 -04:00
David López f6273636b7 Merge pull request #13934 from jmchilton/search_by_user_in_workflow_api
API workflow index allow 'searching' by owner.
2022-05-20 16:30:10 +02:00
David López 5423ad3377 Merge pull request #13932 from jmchilton/deferred_typing
Assorted Python typing.
2022-05-20 16:28:47 +02:00
John Chilton 5941d67069 Merge pull request #13939 from davelopez/fix_history_content_option_defaults
Beta History Collections: set default visible and deleted state in ContentOptions
2022-05-20 09:58:08 -04:00
John Chilton 9adb2a9b03 Merge pull request #13935 from davelopez/bulk_operations_fixes
Bulk operations: more API tests & fixes
2022-05-20 09:57:24 -04:00
davelopez fee9287ac7 Set default visible and deleted state in ContentOptions
Datasets as collection elements do not provide visible and deleted values and are assumed to be visible and non-deleted.
2022-05-19 18:23:25 +02:00
Nicola Soranzo f12ee5ce6d Merge pull request #13925 from bernt-matthias/fix-mulled-respect-conda-channels
fix two bugs in mulled container building
2022-05-19 17:22:18 +02:00
John Chilton 9c09327477 API workflow index allow 'searching' by owner. 2022-05-19 10:48:30 -04:00
John Chilton 87c29cba99 Typing plugin_config.py. 2022-05-19 10:35:06 -04:00
John Chilton d86edfda2c More typing in galaxy.files... 2022-05-19 10:32:56 -04:00
Nicola Soranzo e65f1a8127 Merge pull request #13915 from nsoranzo/drop_uncredit_pull_requestor 2022-05-19 16:20:39 +02:00
davelopez 7c809c73e8 Add API test only owner can apply bulk operation 2022-05-19 15:22:21 +02:00
davelopez 41956d80ad Purge dataset collections contents in bulk
First step, reusing what is used in the old history `DatasetCollectionManager.delete` probably needs a celery task version.
2022-05-19 15:22:21 +02:00
davelopez 303fc4530f Avoid undeleting purged datasets in bulk operations 2022-05-19 15:22:21 +02:00
davelopez 82f5794944 Ensure purging marks datasets as deleted
It does, just stating it in the tests
2022-05-19 15:22:21 +02:00
Matthias Bernt 92edf4fa71 fix a logging error message 2022-05-19 01:37:00 +02:00
Matthias Bernt 7967096faf fix two bugs in mulled container building
respecting conda channels on disk: follow up on https://github.com/galaxyproject/galaxy/pull/13755

- CondaInDockerContext needs the list of channels and not the joined str
- get_file_from_recipe should use local data
2022-05-18 15:34:16 +02:00
Marius van den Beek 2f01b32b94 Merge pull request #13923 from guerler/fix_client_tests
Fix currently failing client tests
2022-05-18 15:28:36 +02:00
Marius van den Beek 3d6b072769 Merge pull request #13836 from galaxybot/dev_auto_update_dependencies
Update Python dependencies
2022-05-17 23:59:05 +02:00
Nicola Soranzo 1ccfdbbb4e Don't fail-fast in API GitHub workflow 2022-05-17 15:11:54 +02:00
Nicola Soranzo 02da77abcb Use `${{ github.workflow }}` in concurrency group name 2022-05-17 15:09:14 +02:00
guerler c0e11fb9fc Add item attributes to content items test 2022-05-17 10:54:22 +02:00
galaxybot d60a1492fd Update Python dependencies 2022-05-17 10:21:28 +02:00
John Chilton f704edc40e Merge pull request #13908 from jmchilton/export_ui_refactor
Decompose History Export UI
2022-05-16 09:38:04 -04:00
Aysam Guerler 0cd689f3ae Merge pull request #13910 from ahmedhamidawan/Advanced_filters_#13840
Advanced filter menu enhancements
2022-05-15 01:54:31 -04:00
Björn Grüning 0aa41c7f11 Merge pull request #13911 from davelopez/handle_bulk_operation_errors
Beta History: handle bulk operation errors
2022-05-14 14:32:38 +02:00
Ahmed Awan 057992e35c Added test for keyup.enter/esc events 2022-05-13 14:54:02 -04:00
davelopez 16748c0338 Add operation error dialog
Will be displayed when some (or all) of the items in the operation could not be successfully processed.
2022-05-13 19:04:52 +02:00
davelopez f4251e2fbb Replace data-test-id with data-description 2022-05-13 18:07:46 +02:00
Nicola Soranzo abb75416a3 Drop uncredit pull requestor list
and give credit to everyone, as in GitHub auto-generated release
notes.
2022-05-13 12:40:48 +01:00
Nicola Soranzo 6b0fb8f228 Merge pull request #13901 from nsoranzo/misc_fixes_20220511 2022-05-13 12:37:50 +01:00