mvdbeek
e2678e7088
Upgrade monaco-yaml
2025-05-16 18:46:13 +02:00
mvdbeek
a4bad06a06
Merge branch 'release_24.2' into dev
2025-05-16 16:24:49 +02:00
mvdbeek
2156e2d98e
Merge branch 'release_24.1' into release_24.2
2025-05-16 16:23:56 +02:00
mvdbeek
9a0d482f1a
Merge branch 'release_24.0' into release_24.1
2025-05-16 16:23:36 +02:00
Marius van den Beek
36ea7dadde
Merge pull request #20259 from mvdbeek/fix_rerun_button_dynamic_tools
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Fix job rerun for dynamic tools
2025-05-16 16:23:08 +02:00
Marius van den Beek
400a9f605b
Merge pull request #20258 from mvdbeek/fix_job_summary
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[24.0] Fall back to name in job summary if no input label given
2025-05-16 16:22:52 +02:00
Dannon
45fdb1de97
Merge pull request #20244 from dannon/group-it-versions
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[25.0] Group Tool Versions in IT Panel
2025-05-16 07:40:02 -04:00
Marius van den Beek
f87df96220
Merge pull request #20247 from mvdbeek/fix_activity_bar_in_setting
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Only show custom tool editor in activity bar settings when user has access
2025-05-16 12:18:39 +02:00
mvdbeek
3eaa78b745
Fix job rerun for dynamic tools
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Fixes https://github.com/galaxyproject/galaxy/issues/20255
2025-05-16 12:17:42 +02:00
mvdbeek
65df554439
Fall back to name in job summary if no input label given
2025-05-16 11:07:41 +02:00
mvdbeek
82e700dab1
Don't show user-defined-tools in activity bar settings if user doesn't have access
2025-05-16 11:06:37 +02:00
Marius van den Beek
fdeb70dc8e
Merge pull request #20245 from dannon/vue-tsc-again
2025-05-16 09:06:40 +02:00
Dannon Baker
cf7091f9c7
Fix vue-tsc issue in ParameterStep; ensure items have valid IDs before rendering
2025-05-15 20:52:22 -04:00
Dannon Baker
4eb42ae8ce
Additional tests including running IT display for InteractiveToolsPanel.
2025-05-15 18:02:11 -04:00
Dannon Baker
8935ae6d66
Refactoring tool-version handling into a separate util
2025-05-15 17:20:29 -04:00
Dannon Baker
d906996de8
Fix version filtering logic in InteractiveToolsPanel to handle version suffixes and improve test coverage
2025-05-15 17:20:29 -04:00
Dannon Baker
0c84885b95
Group tools by lineage for interactiveToolPanel, add testing
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Needs refactoring to align with tool panel and use the same infra
2025-05-15 17:20:29 -04:00
Laila Los
3d6dd63c07
Merge pull request #20232 from jmchilton/file_drop_bug
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Bug fix - allow file drops into PasteData widget.
2025-05-15 21:59:01 +02:00
Dannon
e111b50dc1
Merge pull request #19581 from ksuderman/anvil-theme
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Support setting masthead height in a theme
2025-05-15 14:41:56 -04:00
Dannon
2cf27ac352
Merge branch 'dev' into anvil-theme
2025-05-15 10:55:23 -04:00
John Chilton
a2e5b43230
Bug fix - allow file drops into PasteData widget.
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Fixes https://github.com/galaxyproject/galaxy/issues/20231 .
2025-05-15 10:22:18 -04:00
Marius van den Beek
da98c8b897
Merge pull request #20226 from davelopez/zip_explorer_refactor_remove_indexdb
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Use TUS streaming and remove redundant IndexDB temp store in Zip Explorer
2025-05-15 15:47:50 +02:00
Marius van den Beek
e807b0ff7c
Merge pull request #20190 from dannon/preferred-viz
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Visualization-First Display functionality
2025-05-15 15:46:53 +02:00
mvdbeek
9992ec7f65
Drop unused buttons, fix visualizations tour
2025-05-15 14:26:26 +02:00
mvdbeek
45d17efe58
Fix tour selectors
2025-05-15 14:19:14 +02:00
mvdbeek
fd392b805a
Fix test_charts_h5web, drop test_charts_nvd3_bar since there's no nvd3_bar anymore
2025-05-15 14:19:13 +02:00
mvdbeek
56dbc10c95
Always display eye icon
2025-05-15 14:19:13 +02:00
mvdbeek
93f081d1c2
Selenium test fixes
2025-05-15 14:19:13 +02:00
davelopez
0becc4a053
Refactor type
2025-05-15 13:22:16 +02:00
davelopez
1d495a531b
Fix fingerprint generation in upload for FileStream
2025-05-15 12:42:31 +02:00
davelopez
8ff1624d83
Refactor upload logic in useZipExplorer to utilize streaming for file uploads
2025-05-15 12:37:41 +02:00
davelopez
833bde1a05
Add FileStream interface and update upload logic for streaming files
2025-05-15 12:37:15 +02:00
Dannon Baker
28f872cb93
linting fixes in selectdataset and formrecordfielddefinitions (from upstream)
2025-05-14 18:28:57 -04:00
Dannon Baker
34e1ceec45
Fix vue-tsc emit definition issue
2025-05-14 18:24:42 -04:00
Dannon Baker
f46e326986
Fix vue-tsc tabindex issue -- ensure exists
2025-05-14 18:22:42 -04:00
Dannon Baker
9fdbbc3acf
Fix displayUrl type issue
2025-05-14 18:19:06 -04:00
mvdbeek
83de984f07
Move /api/datatypes/{datatype} to avoid conflict
2025-05-14 20:39:05 +02:00
mvdbeek
f628ee230e
Wait for ... to disappear
2025-05-14 20:37:30 +02:00
mvdbeek
be26a3ffde
Restore edit button in history content item options
2025-05-14 20:37:29 +02:00
mvdbeek
0e7ee07cac
Keep using history panel item edit button in selenium
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New tab needs to be disabled if dataset is running, can follow up later.
2025-05-14 20:37:29 +02:00
mvdbeek
49e10f28e3
Fix dataset edit selenium tests
2025-05-14 20:37:29 +02:00
mvdbeek
ce0e0f6b24
Selenium fixes
2025-05-14 20:37:28 +02:00
davelopez
56970e3022
Remove unused IndexedDB file storage implementation
2025-05-14 18:03:19 +02:00
davelopez
d853e46a25
Refactor local zip file upload to stream direct to blob
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Instead of dumping it to IndexDB and then read again
2025-05-14 18:03:18 +02:00
davelopez
2f83bd7a03
update ro-crate-zip-explorer dependency to version 0.4.0
2025-05-14 18:03:18 +02:00
Marius van den Beek
c6bc71fbb8
Merge pull request #20224 from jmchilton/bug_fix_wizard
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Bug fixes around wizard usage.
2025-05-14 17:38:32 +02:00
John Chilton
65f11002dc
Bug fix - "Generic Wizard".
2025-05-14 09:34:06 -04:00
Dannon Baker
2f306fa2c4
rebuild api schema
2025-05-14 08:50:34 -04:00
Dannon Baker
a0220694ee
Drop all-datatypes visualization mapping endpoint
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We have this for edam data, formats, sniffers, etc., though. It's a
pattern we should make a decision on -- these may be better implemented
as a set of requested keys on the main datatypes summary and exposed
independently on the datatype detail endpoint that has been added.
2025-05-14 08:50:34 -04:00
Dannon Baker
85c55ac094
Drop unused import
2025-05-14 08:50:34 -04:00
mvdbeek