 Aysam Guerler
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d9b284bf5e
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Modify bowtie error handler
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2013-10-16 11:03:51 -04:00 |
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Aysam Guerler
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c32b16e12f
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Fix textarea background color in new upload front end
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2013-10-16 05:16:55 -04:00 |
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Aysam Guerler
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2462ae0008
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Fix for Firefox
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2013-10-16 04:53:59 -04:00 |
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Aysam Guerler
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0df6045ded
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Show file size for manually created files
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2013-10-16 04:05:53 -04:00 |
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Aysam Guerler
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d9573ebb96
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Add url, text input field to upload form
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2013-10-16 03:36:17 -04:00 |
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Aysam Guerler
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20db76ddc0
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Sort genomes in genome selector
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2013-10-15 23:40:46 -04:00 |
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Aysam Guerler
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6a48a732ad
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Add genome selector to file upload
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2013-10-15 21:04:47 -04:00 |
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Dave Bouvier
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d7eccdb0f2
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Merged in BjoernGruening/galaxy-central-bgruening/action_tpye_autoconf (pull request #218)
Implementation of the ./configure && make && make install as autoconf action type.
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2013-10-15 15:21:52 -04:00 |
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Bjoern Gruening
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f04f9400a3
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merge
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2013-10-15 21:03:05 +02:00 |
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Bjoern Gruening
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448e25b8d4
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merge
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2013-10-15 20:49:11 +02:00 |
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Dave Bouvier
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ca85f093e0
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Tool dependencies with errors are now individually uninstalled.
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2013-10-15 13:47:19 -04:00 |
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Greg Von Kuster
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89bbc937ec
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Code cleanup in the tool shed's install_util.
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2013-10-15 12:09:33 -04:00 |
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Nate Coraor
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8b9940d3a9
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Include job_runner_external_id in the dataset error email.
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2013-10-15 11:48:27 -04:00 |
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Dave Bouvier
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b00a3f9046
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Merged in BjoernGruening/galaxy-central-bgruening/action_tpye_make_install (pull request #217)
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2013-10-15 11:30:55 -04:00 |
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Dave Bouvier
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9cb9c06ff7
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Merged in BjoernGruening/galaxy-central-bgruening/R_environment (pull request #219)
Implementation of the a r_environment to easily install R packages in a reproducible way.
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2013-10-15 11:24:21 -04:00 |
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Dave Bouvier
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dc950c15dd
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Merged in BjoernGruening/galaxy-central-bgruening/action_type_misc (pull request #216)
Move the evaluate_template function to the td_common_util file.
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2013-10-15 11:15:57 -04:00 |
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Aysam Guerler
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73670bd2dc
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Make icon number in icon bar a little bit smaller
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2013-10-15 11:14:23 -04:00 |
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Aysam Guerler
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81610722c2
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Add onbeforeunload functions to iconbar item
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2013-10-15 00:12:08 -04:00 |
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John Chilton
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0f63caaff0
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Bug fix in scripts/functional_tests.py.
A tempdir is referenced before it is created in certain cases.
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2013-10-14 21:50:12 -05:00 |
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John Chilton
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ce643e393a
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Bug fix in test exception handling code.
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2013-10-14 21:50:12 -05:00 |
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Ross Lazarus
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273632f31c
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branch merge
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2013-10-15 09:38:19 +11:00 |
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Dave Bouvier
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ff28741642
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Explicitly uninstall tool dependencies that are in an error state.
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2013-10-14 16:46:41 -04:00 |
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Aysam Guerler
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3e8f294ea5
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Improvements for the upload box
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2013-10-14 16:35:09 -04:00 |
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Aysam Guerler
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b30c8e126d
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Upload box add user validation
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2013-10-14 15:11:49 -04:00 |
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Dave Bouvier
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a948eaa352
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Fill form by name instead of number.
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2013-10-14 13:55:39 -04:00 |
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Aysam Guerler
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fbffe7f8e7
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Add logging information to upload box
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2013-10-14 13:52:41 -04:00 |
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Martin Cech
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d81c761fa6
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registration form tweaks, preventing the form to be accidentally submitted multiple times (creating duplicate users), includes user-side basic validation
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2013-10-14 12:06:34 -04:00 |
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Nate Coraor
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ff8366081b
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Revert changes from 384240b8cd29 that result in a failure to detect job completion in the drmaa runner on DRMs that do not retain jo
b information once a job has exited the queue.
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2013-10-14 12:00:57 -04:00 |
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Greg Von Kuster
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2a5c2cdf2d
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Make communication between Galaxy and the Tool Shed to get status information for installed repositories backward compatible to the 12/20/12 Galaxy release.
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2013-10-14 11:12:07 -04:00 |
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Ross Lazarus
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c860c25f77
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Remove unused test-data/rtestouts
Remove references in converters to g2.bx.psu.edu
Note leaving rgenetics converters and datatypes - ped still used in genomic variation tools.
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2013-10-14 21:43:32 +11:00 |
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Jeremy Goecks
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a62bdf7d2f
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Update Trackster reference track config. Pack script.
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2013-10-13 17:39:27 -04:00 |
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Jeremy Goecks
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cc8bf8d613
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Trackster: prevent inadvertent keyboard navigation when configuring track.
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2013-10-13 17:09:39 -04:00 |
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Jeremy Goecks
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191880fb5c
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Trackster: fold name attribute into object preferences.
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2013-10-13 17:00:27 -04:00 |
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Jeremy Goecks
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b0e4c28a0b
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Trackster: fold content_visible flag into config.
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2013-10-13 16:28:13 -04:00 |
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Jeremy Goecks
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076c2c4b5f
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Automated merge.
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2013-10-13 15:46:27 -04:00 |
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Jeremy Goecks
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1659128179
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Trackster: simplify constructor and config logic using object attributes.
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2013-10-13 15:39:08 -04:00 |
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Aysam Guerler
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b61c2d528b
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Fix upload box plugin
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2013-10-12 13:07:00 -04:00 |
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Jeremy Goecks
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f40d396f4f
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Trackster: clean up link attributes.
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2013-10-11 21:59:34 -04:00 |
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Jeremy Goecks
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c8ec1df754
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JSHint-driven Trackster code cleanup.
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2013-10-11 17:27:18 -04:00 |
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Jeremy Goecks
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be3e3864a8
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More trackster cleanup.
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2013-10-11 16:34:28 -04:00 |
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Aysam Guerler
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03f09b47cc
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Fix for removed galaxy.css
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2013-10-11 16:09:16 -04:00 |
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Daniel Blankenberg
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e9d2043132
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Better handling of creating peek for tabular files when metadata is missing.
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2013-10-11 15:03:13 -04:00 |
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Aysam Guerler
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18237898d1
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Deactivate upload icon
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2013-10-11 14:58:57 -04:00 |
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Aysam Guerler
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aebfcd69bb
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Adjustments for IE10, upload front end
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2013-10-11 14:57:45 -04:00 |
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Aysam Guerler
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8313e096c1
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Add datatypes to api and connect with file type selector of the upload front end
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2013-10-11 14:29:38 -04:00 |
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Daniel Blankenberg
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ef4641e6ca
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Unicodify dependency installation stderr and stdout
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2013-10-11 13:01:22 -04:00 |
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Aysam Guerler
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051845cd7d
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Merge
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2013-10-11 12:12:19 -04:00 |
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Aysam Guerler
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5b667b0937
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Use state event listener to queue uploads
|
2013-10-11 12:04:26 -04:00 |
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Jeremy Goecks
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5d1ffac35b
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Visualization framework: code cleanup.
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2013-10-11 12:03:55 -04:00 |
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Jeremy Goecks
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7d6d29158a
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Trackster: (a) fix bug that unintentionally modified drawing region; (b) more reference track cleanup; (c) remove console logging statements. Pack scripts.
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2013-10-11 11:53:13 -04:00 |
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