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Author SHA1 Message Date
mvdbeek d62f688221 Tweak docs for container_resolver_* options 2021-11-12 14:47:28 +01:00
Nicola Soranzo 58693d621e Merge pull request #12856 from davelopez/temporary_downgrade_fastapi_version 2021-11-04 21:32:08 +00:00
davelopez b678b1dd97 Temporary downgrade FastAPI to v0.68.2 2021-11-04 19:00:15 +01:00
John Chilton fb03324940 Merge pull request #12849 from nsoranzo/sync_selenium_gh_wfs 
Sync Selenium GitHub workflows
 2021-11-04 11:09:46 -04:00
Nicola Soranzo dc715ef2d7 Merge branch 'release_21.09' into dev 2021-11-04 11:48:46 +00:00
Marius van den Beek fe889de9bd Merge pull request #12851 from nsoranzo/release_21.09_fix_CONVERTER_fasta_to_bowtie_color_index 
[21.09] Downgrade bowtie requirement for CONVERTER_fasta_to_bowtie_color_index
 2021-11-04 12:46:25 +01:00
Nicola Soranzo 75196db5cd Downgrade bowtie requirement for CONVERTER_fasta_to_bowtie_color_index 2021-11-04 09:56:55 +00:00
Nicola Soranzo 3cb14842cc Sync Selenium GitHub workflows 
In particular:
- Cancel in-progress concurrent builds for selenium_beta workflow
- Caching of `yarn.lock` for selenium_beta
- Upload run_selenium_tests.html in case of failure for selenium workflow
 2021-11-04 03:25:29 +00:00
Dannon 542b1cd5fb Merge pull request #12802 from dannon/beta-history-menus 
Beta history menu reorg, display fixes.
 2021-11-03 14:08:46 -04:00
mvdbeek f04632e0f1 Merge branch 'release_21.09' into dev 2021-11-03 16:16:42 +01:00
Marius van den Beek 98132674cb Merge pull request #12844 from mvdbeek/version_bump_galaxy_tool_util_converter_dependency_fix 
[21.09] Version bump galaxy tool util and converter dependency fix
 2021-11-03 16:15:23 +01:00
Marius van den Beek 1a3f4aeaf4 Merge pull request #12836 from davelopez/upgrade_fastapi_dependencies 
Upgrade FastAPI to v0.70.0
 2021-11-03 16:15:00 +01:00
DannonandOleg Zharkov b335fe451d Update client/src/components/History/HistoriesMenu.vue 
Co-authored-by: Oleg Zharkov <jos.to.new@gmail.com>
 2021-11-03 10:32:18 -04:00
Dannon Baker f06be541b5 Update aria-describedby for history operation moves 2021-11-03 10:31:59 -04:00
mvdbeek 8e035ffbdf Add version to fasta_to_index builders 2021-11-03 15:30:49 +01:00
Dannon 83ea80c170 Merge pull request #12843 from OlegZharkov/fix-lock 
fix yarn lock
 2021-11-03 10:07:51 -04:00
Oleg Zharkov becf32efb1 fix yarn lock 2021-11-03 14:49:32 +01:00
Dannon 5907866e6d Merge pull request #12838 from OlegZharkov/dev 
fix typo in bookmarking
 2021-11-03 08:30:59 -04:00
Dannon 38bbc4f206 Merge pull request #12840 from OlegZharkov/check-wf-bookmark 
Fix bookmarking workflow twice
 2021-11-03 08:11:38 -04:00
davelopez af4ef0cedf Upgrade FastAPI to v0.70.0 
https://github.com/tiangolo/fastapi/releases/tag/0.70.0
 2021-11-03 10:48:53 +01:00
davelopez 8788b8c513 Upgrade FastAPI to v0.69.0 
https://github.com/tiangolo/fastapi/releases/tag/0.69.0
 2021-11-03 10:46:32 +01:00
davelopez a9714da2c6 Upgrade FastAPI to v0.68.2 
https://github.com/tiangolo/fastapi/releases/tag/0.68.2
 2021-11-03 10:46:32 +01:00
mvdbeek 2bda35b55e Version 21.9.1 of tool-util (tag galaxy-tool-util-21.9.1). 2021-11-03 09:52:35 +01:00
mvdbeek 150570afd5 Merge branch 'release_21.09' into dev 2021-11-03 09:20:59 +01:00
Marius van den Beek 368a4b83d3 Merge pull request #12839 from jmchilton/fix_requirement_linter 
[21.09] Backport #12527 - needed to fix the converter tests.
 2021-11-03 09:19:23 +01:00
Marius van den Beek f99510f3aa Merge pull request #12833 from abretaud/patch-9 
GxITs: don't always add trailing slash to entry point url
 2021-11-03 09:06:19 +01:00
Oleg Zharkov 5cc8fbfbaa switch value in bookmarking 2021-11-02 19:29:08 +01:00
Oleg ZharkovandAuthor: davelopez ef075621ce don't add bookmarked wf to menu_entries if it's already there 
Co-authored-by: Author: davelopez <46503462+davelopez@users.noreply.github.com>
 2021-11-02 18:59:42 +01:00
John Chilton 912f7d99c7 [21.09] Backport #12527 - needed to fix the converter tests. 2021-11-02 12:43:39 -04:00
Oleg Zharkov 07a9e0c2b1 fix typo in bookmarking 2021-11-02 16:28:04 +01:00
mvdbeek 75606acc05 Merge branch 'release_21.09' into 'release_22.01' 2021-11-02 12:08:07 +01:00
mvdbeek b5ce46c929 Update version to 21.09.1.dev0 2021-11-02 12:08:06 +01:00
mvdbeek 6b29202be6 Update version to 21.09. v21.09 2021-11-02 12:08:02 +01:00
mvdbeek bc329c7b84 Merge branch 'release_21.09' into dev 2021-11-02 11:54:42 +01:00
mvdbeek 68d6d203b9 Merge branch 'release_21.05' into release_21.09 2021-11-02 11:33:01 +01:00
Martin Cech 2b25c3760a Merge pull request #12832 from mvdbeek/disable_dockerhub_push 
[21.05] Disable dockerhub pushes
 2021-11-02 11:20:09 +01:00
Anthony Bretaudeau d896908395 Don't always add trailing slash 2021-11-02 10:33:12 +01:00
mvdbeek 3a7324cbb5 Disable dockerhub pushes 2021-11-02 09:59:36 +01:00
Marius van den Beek 46c0a99237 Merge pull request #12821 from mvdbeek/release_21.09_release_notes_update 
[21.09] Finalize release notes
 2021-11-02 09:55:44 +01:00
mvdbeek a6207d043d Add last 2 PRs to release notes 2021-11-02 08:57:42 +01:00
Marius van den Beek 0c28fc6877 Merge pull request #12827 from dannon/pin-around-uaparser 
[21.09] Pin a resolution for ua-parser-js to 0.7.30
 2021-11-02 08:43:32 +01:00
mvdbeek 4257cd5531 Edits from Beatriz 2021-11-02 08:42:22 +01:00
Marius van den Beek 80dd362f20 Merge pull request #12830 from nsoranzo/release_21.09_followup_on_12795 
[21.09] Allow sessionless access to some datasets API endpoints
 2021-11-02 07:40:37 +01:00
Nicola Soranzo eafca3f68c Allow sessionless access to some datasets API endpoints 
Commit c92fcb91d7 broke a BioBlend test where
a public dataset is accessed anonymously via the API:

https://github.com/galaxyproject/bioblend/blob/main/bioblend/_tests/TestGalaxyDatasets.py#L181-L190

See the GitHub workflow failed jobs:

https://github.com/galaxyproject/bioblend/runs/4074342140?check_suite_focus=true

N.B.: in terms of access control, `legacy_expose_api_anonymous` is
equivalent to `expose_api_anonymous_and_sessionless` (not
`expose_api_anonymous`).
 2021-11-02 02:15:13 +00:00
John Chilton f5f18cf863 Merge pull request #12829 from mvdbeek/fix_anon_api_tests 
Create new history for anonymous API users via history/current_histor…
 2021-11-01 19:10:13 -04:00
mvdbeek 54cc6b68e4 Create new history for anonymous API users via history/current_history_json 2021-11-01 21:39:42 +01:00
Marius van den Beek f8a11927de Merge pull request #12826 from mvdbeek/fix_mypy_tests_merge_forward 
Fix mypy tests that broke while merging forward
 2021-11-01 21:39:05 +01:00
Dannon Baker ce2280bd89 Pin a resolution for ua-parser-js to 0.7.30 
xref: https://snyk.io/vuln/SNYK-JS-UAPARSERJS-1766952
 2021-11-01 13:51:22 -04:00
mvdbeek 8b7614ccd9 Fix mypy tests that broke while merging forward 2021-11-01 18:46:05 +01:00
mvdbeek 58b2837c7c Merge branch 'release_21.09' into dev 2021-11-01 18:17:54 +01:00