Commit Graph
2791 Commits
Author SHA1 Message Date
Dannon Baker 28deb88dd6 Fix routing for tool execution from gtn webhook 2022-01-06 13:13:03 -05:00
Marius van den Beek f57730093c Merge pull request #13118 from dannon/news-gtn-hooks-safety
Webhooks robustification for news and gtn
2022-01-06 17:26:40 +01:00
Dannon Baker c6bcea5a8c For gtn/news frames, ensure frame is engaged prior to dismissal.
Guarding here is simpler than tracking event handlers and making
assumptions.
2022-01-05 08:49:55 -05:00
mvdbeek a677623df3 Fix tour builder for instances with prefix 2022-01-05 13:31:58 +01:00
Dannon Baker b9505426e2 Wrap default webhooks in iifes to prevent global pollution 2022-01-04 22:29:17 -05:00
Dannon Baker 0949d3e01a Delay iframe creation for news until it's actually clicked 2022-01-04 14:21:54 -05:00
davelopez c0134f97d6 Fix broken library datasets links
- Some links to library elements were not replaced with the new library router paths.
- Fix undeleted dataset link in toast message.
2021-12-13 13:46:19 +01:00
guerler 43e80d1fcf Use utilities npm package, remove utilities, fix visualizations 2021-11-13 22:20:07 -05:00
guerler 0658c1607e Declare asBoolean as module function in nvd3 2021-11-05 20:03:46 -04:00
guerler 7358c85783 Allow visualization to process either legacy string based booleans and true booleans 2021-11-01 00:54:08 -04:00
mvdbeek 497f6a9835 Merge branch 'release_21.09' into dev 2021-10-26 16:30:19 +02:00
mvdbeek 4262610b71 Merge branch 'release_21.05' into release_21.09 2021-10-26 16:29:37 +02:00
Dannon Baker c8d6d39c5a Manually hack the built static, too -- this needs followup in dev to be clean and remove artifacts 2021-10-26 08:42:08 -04:00
Dannon Baker c220f6d55a The surgical in-place fix to prebuilt msa.js to account for 'at' being in array now in ff/chrome 2021-10-26 08:42:08 -04:00
Oleg Zharkov bf78a3d2b5 Merge branch 'dev' into webpack5 2021-10-06 20:44:01 +02:00
Helena Rasche a5a90a1a59 fix branch for release notes 2021-10-01 14:37:21 +02:00
Dannon Baker bb6be48540 Drop the 'downgrade' now that 21.09 is frozen (will mer
ge prerelease notes along with this)
2021-09-28 08:03:01 -04:00
Dannon Baker fe3d2fbafd Merge remote-tracking branch 'upstream/dev' into webpack5 2021-09-22 09:18:14 -04:00
Dannon Baker 7925d5f8c0 Adjust welcome build location to standard dist, drop artifacts 2021-09-16 23:27:44 -04:00
Dannon Baker a14c82ad00 Swap to @galaxyproject namespace on npm 2021-09-16 23:27:40 -04:00
Alexander OSTROVSKY 24f13618c3 remove image files 2021-09-16 23:23:03 -04:00
Alexander OSTROVSKY 9b9f379265 New User Welcome page
make runnable from pr. Still need to debug

divs out

tree

broken into components

cleaning

formatting, file names, jest tests

jest

removed image files, will be retrieved via npm or separate repo

update

plugin via webpack

webpack plugin

change to plugin to prevent repeated image downloading

update

add actual page accessible from help and registration

Full draft

jest fix, next to make package customizeable

yarn lock

fix

update

Update

Refactor from here for the confiuration stuff -- this displays the bundle

drop plugin_build_hash -- these should never be committed

Update plugin gitignore

Oops, left in a debug
2021-09-16 23:22:57 -04:00
Sergey Golitsynskiy c068d3319f Drop sylink to tool_conf.xml.main 2021-09-13 14:58:51 -04:00
Helena Rasche f805b0dd17 Add future runway 2021-09-08 17:27:05 +02:00
Helena Rasche 36782f9b9d Downgrade 21.09 to 05, temporarily 2021-09-08 17:12:57 +02:00
Dannon Baker 5c78a79123 Had my comments backwards, simplify selector 2021-09-02 08:52:06 -04:00
Dannon Baker 33c64034dc Cleanup 2021-09-02 08:19:43 -04:00
Dannon Baker b5b4af7a24 Use fontawesome-regular to show no notifications 2021-09-02 08:18:37 -04:00
Helena Rasche b02cbdfad9 Implement news webhook to handle release announcements 2021-09-01 15:56:52 +02:00
Dannon Baker 2ade88fabe Merge remote-tracking branch 'upstream/dev' into webpack5 2021-08-20 09:03:51 -04:00
guerler b8c5c56d07 Fix tour based selenium test for core galaxy ui 2021-08-10 14:31:13 -04:00
guerler ea10fbe89b Make colors optional in nvd3 visualizations 2021-08-02 10:38:42 -04:00
Dannon Baker 7586efd98a Update remaining templates to new bundle entrypoints 2021-07-27 08:55:55 -04:00
Nicola Soranzo 9c08ecc258 Replace fa-refresh icon with fa-redo for job re-run buttons
to distinguish it from the sync button we use e.g. to refresh the history.
2021-06-15 23:23:01 +01:00
Nate Coraor 2ddc310711 Update dependency resolver docs and drop sample XML file in favor of
direct configuration under the dependency_resolvers key of galaxy.yml.
2021-06-07 18:16:07 -04:00
mvdbeek 3d59717142 Add celery setup that regularly cleans audit_table 2021-05-11 18:34:30 +02:00
almahmoud ed362c48b9 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into alex_branch 2021-05-05 12:47:09 -04:00
almahmoud 63510bea23 Container monitor in destination 2021-05-04 17:09:23 -04:00
mvdbeek 2b9a6a96a4 Merge branch 'release_21.01' into dev 2021-04-27 16:13:10 +02:00
Helena Rasche 19d3119428 Patch to click the button which should be more stable 2021-04-14 17:08:05 +02:00
mvdbeek 90ebe45802 Let factory figure out where the galaxy config file lives 2021-04-02 18:47:41 +02:00
mvdbeek cbee46007b Add fallback for pure python worker 2021-04-02 18:47:41 +02:00
mvdbeek 7b5e09ec08 Set worker timeout to 300 seconds
If this is too short gunicorn will restart the worker before they
finish booting.
2021-04-02 18:44:15 +02:00
Dannon Baker 3967906260 Incremental config changes; this makes schema loader resolve correctly 2021-03-29 09:29:24 -04:00
Dannon Baker 8702980d40 Swap to gunicorn w/ uvicorn worker 2021-03-29 09:29:24 -04:00
Dannon Baker 1174dac296 Move recalculate task over. Debug mode for celery, refactor a bit (still no bueno, just trying to get end-end complete) 2021-03-29 09:29:24 -04:00
Dannon Baker 1c6198c42d Split celery worker and tasks up 2021-03-29 09:29:24 -04:00
Dannon Baker f11bacf9d3 Starts a celery worker (that does nothing yet, but it does connect to my local redis) 2021-03-29 09:29:24 -04:00
Dannon Baker 2ce193821a Basic dev reloading w/ circus 2021-03-29 09:29:24 -04:00
Anthony Bretaudeau fea905a2b5 add symlink 2021-03-09 17:31:31 +01:00