Commit Graph
30151 Commits
Author SHA1 Message Date
John Chilton cc3c3a9b92 Implement outline of Jupyter testing. 2017-10-02 09:50:37 -04:00
John Chilton 395eefcbb2 Selenium - implement managed_history decorator for tests.
Creates and deletes a history for tests - good for tests meant to aim at production servers that need to have useful metadata and need to be cleaned up.
2017-10-02 09:50:37 -04:00
John Chilton 14d4367cc4 Allow forcing a particular user for some Selenium tests. 2017-10-02 09:50:37 -04:00
John Chilton c9915fc7e6 Switch to configurable, scaling approach to Selenium timeouts.
Implement different "WAIT_TYPES" and try to sleep for different amounts of time based on what is being waited for.

Replace sleep statements in addition to Selenium wait on statements.
2017-10-02 09:50:37 -04:00
John Chilton afaea964cf Selenium - cleanup duplication of DEFAULT_PASSWORD variable. 2017-10-02 09:50:37 -04:00
John Chilton 28c8644f02 More history panel abstractions in NavigatesGalaxy. 2017-10-02 09:50:37 -04:00
John Chilton 3f28f84770 NavigatesGalaxy class docs. 2017-10-02 09:50:37 -04:00
John Chilton cce59aeb55 Remove deprecated method click_hda_title in navigates_galaxy. 2017-10-02 09:50:37 -04:00
John Chilton 27ef24601c Fix typo. 2017-09-29 15:06:26 -04:00
John Chilton 2e3c6e8941 Selenium - bug fix for checking workflow names on workflow index page.
xref https://jenkins.galaxyproject.org/job/selenium/654/artifact/654-test-errors/test_rename2017092708331506515637/
2017-09-29 15:06:26 -04:00
John Chilton e132521255 Selenium - bug fix for grabbing history name during transition.
xref https://jenkins.galaxyproject.org/job/selenium/654/artifact/654-test-errors/test_history_switch2017092708211506514917/
2017-09-29 15:06:26 -04:00
John Chilton fd90d76453 Cleanup delayed action in history-view.js.
Might fix #4698 but who knows.
2017-09-29 15:04:24 -04:00
John Chilton 73bb4ba8c2 Merge pull request #4711 from guerler/replace_history_permission_form
Removes the history permissions form mako
2017-09-29 12:44:26 -04:00
John Chilton e5597639e2 Merge pull request #4725 from nsoranzo/typo_fixes
Typo fixes and small cleanups
2017-09-29 12:36:08 -04:00
guerler f97392c1db Merge branch 'dev' into replace_history_permission_form 2017-09-29 10:24:01 -04:00
guerler dd4d077a81 Fix error message 2017-09-29 10:22:40 -04:00
Nicola Soranzo cc983c318b Typo fixes and small cleanups 2017-09-29 14:24:40 +01:00
Nicola Soranzo 4d3c78d099 Fix typo in function name
Follow-up on https://github.com/galaxyproject/galaxy/pull/4635
2017-09-29 14:24:40 +01:00
John Chilton 4b7bd98b30 Merge pull request #4665 from mvdbeek/extend_job_search
Extend job search for hdcas
2017-09-29 08:38:28 -04:00
Nicola Soranzo 95a5e8d6c8 Merge branch 'release_17.09' into dev
Conflicts:
	static/scripts/bundled/libs.bundled.js
	static/scripts/bundled/libs.bundled.js.map
2017-09-29 12:38:52 +01:00
Eric Rasche 3004e11492 Merge pull request #4723 from scholtalbers/patch-1
Update reports.md with a link to the community hub
2017-09-29 07:14:56 +00:00
scholtalbers 911dc61a4d add section anchor to url 2017-09-29 07:38:51 +02:00
Björn Grüning 38b19d4c47 Merge pull request #4715 from dannon/proxy_prefix_model_fixes
[17.09] Pull a minor tweak out of the JS-side urlFor refactoring
2017-09-28 22:35:07 +02:00
guerler a5c83b3ce9 Use same push url format as in other push requests 2017-09-28 14:41:20 -04:00
guerler f88ce0b382 Merge branch 'dev' into replace_history_permission_form 2017-09-28 14:37:20 -04:00
scholtalbers d2fd087702 Update reports.md with a link to the community hub 2017-09-28 20:08:36 +02:00
Dannon Baker 297cb2da4b Merge branch 'replace_page_edit_form' into dev 2017-09-28 12:57:20 -04:00
Nicola Soranzo f4941e5422 Merge branch 'release_17.09' into dev
Conflicts:
	static/scripts/bundled/admin.bundled.js
	static/scripts/bundled/admin.bundled.js.map
	static/scripts/bundled/analysis.bundled.js
	static/scripts/bundled/analysis.bundled.js.map
	static/scripts/bundled/libs.bundled.js.map
2017-09-28 16:52:46 +01:00
Dannon Baker d49c49d0ee Pull a minor cosmetic fix out of the urlFor refactoring. Might as well be consistent in the release. 2017-09-28 11:29:26 -04:00
mvdbeek 7d260d0b50 Tighten job search result
We now expand incoming tool parameters, so that we have a dictionary of all
tool parameters (i.e specified/posted parameters and defaults). We start the
search by quering the database for jobs using the same tool id for the same
owner with the same input datasets, taking into account copied
dataset(-collection)s.  We then replace all dataset ids (HDA/LDA or HDCA) in
the parameter dict with the input data used for the jobs queried in the first
step. This allows us to check every parameter for a match with the job.
2017-09-28 16:51:37 +02:00
Marius van den Beek 1f0086de67 Merge pull request #4720 from erasche/integrity-exceptions
Add logging during for script integrity exceptions
2017-09-28 15:18:57 +02:00
E Rasche 08b90d699d Move sleep 2017-09-28 14:27:01 +02:00
John Chilton 7167c0434b Merge pull request #4714 from dannon/cachebust_ies
[17.09] Cachebust IE require'd files (jupyter.js, etc).
2017-09-28 07:59:25 -04:00
E Rasche 7e7369c168 collapse logging + : 2017-09-28 11:52:04 +02:00
E Rasche 8553374705 Unicodify anything logged due to the french 2017-09-28 08:11:01 +00:00
E Rasche 955206b052 Another debugging statement 2017-09-28 08:08:53 +00:00
E Rasche c421f29d85 Log more information on command execution
So we can tell *why* it failed on not just that it failed.
2017-09-28 08:07:59 +00:00
Aysam Guerler 407da92f88 Merge pull request #4716 from dannon/workflow_list_messaging
[17.09] Add message (error and info) display to workflows display list.
2017-09-27 18:31:11 -04:00
guerler 958d917cb5 Display error message when workflow loading fails 2017-09-27 18:22:43 -04:00
Dannon Baker 266361d151 Minor formatting. 2017-09-27 17:51:46 -04:00
Dannon Baker 8820e3bc58 Rebuild client. 2017-09-27 17:47:53 -04:00
Dannon Baker 63022e6718 Drop stray debugging statement. 2017-09-27 17:45:59 -04:00
Dannon Baker fa4c1b5da7 More fixes for the workflow list page, and some general cleanup. 2017-09-27 17:45:17 -04:00
Dannon Baker 03394d44c9 Support workflow list messaging 2017-09-27 17:06:22 -04:00
guerler a8f59a46a9 Merge branch 'dev' into replace_page_edit_form 2017-09-27 15:35:02 -04:00
Nate Coraor 9a0511e883 Merge branch 'release_17.09' into dev 2017-09-27 15:15:01 -04:00
Dannon Baker f709ddcfe6 Add requirejs config to cachebust IE require'd files. 2017-09-27 14:53:24 -04:00
guerler 075c0a7684 Remove unused id parsing 2017-09-27 14:43:49 -04:00
guerler d61db29f29 Disable multi operation for dataset permissions view 2017-09-27 14:23:58 -04:00
guerler 7f57010a43 Fix spacing 2017-09-27 14:22:23 -04:00