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Author SHA1 Message Date
Dannon Baker aafb00ff1d Update doc, swap to string literals for log statements 2020-04-22 17:10:35 -04:00
Dannon Baker 64cf1d0aff Add log statement explaining generation of the hashfile 2020-04-22 17:07:23 -04:00
Dannon Baker b772abebdf Simplify hash file logic; minor refactoring. 2020-04-22 17:06:44 -04:00
Dannon Baker 52e6027109 Standardize formatting 2020-04-21 16:53:00 -04:00
Oleg Zharkov b2d8965802 make individual plugin build hash for every viz 2020-04-21 18:16:04 +02:00
Oleg Zharkov f5253b4027 skip visualization build, if not changes were registered 2020-04-20 18:17:48 +02:00
John Chilton 4f2a0459b8 Merge pull request #8109 from bernt-matthias/topic/openms-datatypes 
new data types for OpenMS
 2020-04-20 10:54:57 -04:00
Marius van den Beek ef42d37dd2 Merge pull request #9072 from jmchilton/disable_admin_toolshed_controller 
Disable the admin_toolshed controller (except for tests).
 2020-04-20 16:50:48 +02:00
Dannon 3d834f40aa Merge pull request #9633 from bernt-matthias/topic/xsd_links 
fix links in Galaxy xsd docs
 2020-04-20 10:00:11 -04:00
John Chilton 36bb175c00 Merge pull request #9628 from davebx/selenium_test_admin_toolshed 
Add selenium test for admin toolshed operations.
 2020-04-20 09:33:59 -04:00
M BerntandNicola Soranzo 2d021f6506 Apply suggestions from code review 
Co-Authored-By: Nicola Soranzo <nicola.soranzo@gmail.com>
 2020-04-20 13:35:27 +02:00
Matthias Bernt c77efbf89b fix links in Galaxy xsd docs 2020-04-20 12:57:10 +02:00
Aysam Guerler df6a107eb5 Merge pull request #9622 from anuprulez/fix_tensorflow 
Fix tensorflow bug
 2020-04-19 12:32:17 -04:00
Dave B a91bd79316 Missing import, E261. 2020-04-17 16:03:51 -04:00
Dave B 923e25826f Also be consistent with type of quotes used. 2020-04-17 15:34:19 -04:00
Dave B 8858339bf0 Remove commented out wait, add some information in comments. 2020-04-17 15:33:05 -04:00
Dave B 8e4dd10bae Add test for admin toolshed operations. 
- Search
- Install
- Uninstall

Also adds some selectors in navigation.yml and element IDs where
appropriate to make it a little easier for the tests to find the right
DOM elements.
 2020-04-17 15:23:21 -04:00
Anup Kumar 6d3db7d283 Update str 2020-04-16 19:10:37 +02:00
Anup Kumar 573654c2da Fix tensorflow graph issue 2020-04-16 18:32:46 +02:00
Anup Kumar 88c6ea3f7b Merge branch 'dev' of https://github.com/galaxyproject/galaxy into fix_tensorflow 2020-04-16 15:56:41 +02:00
Anup Kumar b6669c31cf Add predict 2020-04-16 15:55:45 +02:00
John Chilton aaa8a2f7a8 Merge pull request #9620 from lecorguille/patch-2 
Fix ELIXIR AAI
 2020-04-16 09:25:42 -04:00
Anup Kumar c8fc93d294 Refactor 2020-04-16 13:05:59 +02:00
Gildas Le Corguillé eeddaeb1ce Fix ELIXIR AAI - fix 2020-04-16 11:11:33 +02:00
Gildas Le Corguillé 712790539e Fix ELIXIR AAI 2020-04-16 10:05:48 +02:00
Anup Kumar ff0a080540 Add graph consistency 2020-04-16 01:37:18 +02:00
Dannon 47a9edb777 Merge pull request #9583 from OlegZharkov/destination-parameters 
Vuefy Job Destination Parameters
 2020-04-15 18:11:24 -04:00
Oleg Zharkov db103e759f add @require_admin to destination parameters API 2020-04-15 21:53:06 +02:00
Dannon Baker e38c4a764b Drop unused import 2020-04-15 14:53:54 -04:00
Dannon Baker 4cde46b48b require job id for destination params block 2020-04-15 14:52:24 -04:00
Dannon Baker 4e0cf47e40 Drop unused datasetId from JobDestinationParams 2020-04-15 14:49:26 -04:00
Dannon Baker cf65e1339b Minor refactoring/simplification of vuex usage. 2020-04-15 14:48:35 -04:00
Dannon Baker b378fd5435 Drop empty/unused local data. 2020-04-15 13:48:22 -04:00
Dannon Baker 253901a909 Drop unused properties for JobDestinationParms component 2020-04-15 13:47:58 -04:00
Dannon 6264e06a01 Merge pull request #9616 from davebx/selenium_nav 
Add IDs to admin links and selenium navigation.
 2020-04-15 12:53:48 -04:00
Dave B 5a1df10230 Add IDs to admin links and selenium navigation. 2020-04-15 10:30:31 -04:00
Dannon 267e7ebe56 Merge pull request #9529 from nsoranzo/update_dependencies 
Full Python dependencies update
 2020-04-13 14:53:31 -04:00
Aysam Guerler 7855103d2c Merge pull request #9569 from anuprulez/workflow_recommendations 
Tool recommendations in workflow editor
 2020-04-13 11:44:27 -04:00
Anup Kumar 9a62d6e870 Merge branch 'dev' of https://github.com/galaxyproject/galaxy into workflow_recommendations 2020-04-13 15:46:58 +02:00
Anup Kumar 060d83294f Fix prettier 2020-04-13 13:33:23 +02:00
Anup Kumar cbc84dda0d Use popover counter 2020-04-13 13:12:22 +02:00
Nicola Soranzo 9eae2c58cf Always set HOME to the target user's dir when calling sudo -E 2020-04-13 00:51:39 +01:00
Nicola Soranzo 38f93ba318 Remove unnecessary pyparsing import 
Not needed any more after commit 413f8cee13 .
 2020-04-12 22:39:23 +01:00
Nicola Soranzo a5c9b82edc Fix API tests for updated gxformat2 syntax 2020-04-12 22:39:23 +01:00
mvdbeek 0a2ed24a9d Skip migrations 2020-04-12 22:39:23 +01:00
mvdbeek 780bc0560c Add temporary symlinks, need to update jenkins after merging the PR 2020-04-12 22:39:23 +01:00
mvdbeek 74a27f3de0 Move docker image build to ubuntu 18.04, drop unused stuff 2020-04-12 22:39:23 +01:00
John Chilton 1b1aa4a9e8 Fix test_fail_job_tool_unavailable.py for updated gxformat2 syntax. 2020-04-12 22:39:23 +01:00
Nicola Soranzo 92ff319324 Full Python dependencies update 
using `make update-dependencies`.
 2020-04-12 22:39:23 +01:00
Nicola Soranzo c11dee5886 Merge pull request #9528 from mvdbeek/twill_work 
Make Toolshed Python 3 compatible & tests
 2020-04-12 20:52:29 +01:00